KEGG   Paralichthys olivaceus (Japanese flounder): 109647468
Entry
109647468         CDS       T06037                                 
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
  KO
K12848  U4/U6.U5 tri-snRNP component SNU23
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109647468 (zmat2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pov03041]
    109647468 (zmat2)
Spliceosome [BR:pov03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109647468 (zmat2)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    109647468 (zmat2)
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz zf-U1 SNRNP27 DUF4250 TcdA_TcdB_pore Herpes_gp350_A zf-C2H2
Other DBs
NCBI-GeneID: 109647468
NCBI-ProteinID: XP_019968833
Position
Unknown
AA seq 201 aa
SSSPLQSNKNDFRRKWDKDEYENLAQKRLAEERDRERRDGKIAPPVKRELLRHRDYKVDL
ESKLGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSS
LDQVKKRFEVNKKKLEEKQKEYDFEERMKELREEEEKAKAYKKEKQKERKRRAEDDVDFE
EDDEMAAVMGFSGFGSSKKSH
NT seq 606 nt   +upstreamnt  +downstreamnt
tcatcttctcctcttcagtccaataagaacgacttccgtcggaagtgggacaaggacgag
tatgaaaacctcgctcagaaacgactggcggaggagagagacagggagaggagagatggg
aaaattgctccgccggtcaaacgggaactcctgcgtcacagggactacaaagtggatctg
gagtctaaactgggaaagaccattgtcatcactaagaccactcctcaggcggagatgggc
ggttattactgtaacgtctgtgactgtgtcgtcaaagactccatcaacttcttggatcac
atcaatggaaagaaacaccagaggaaccttggcatgtcgatgcgtgtggagcgttcgtct
ttggatcaggtgaagaaacgtttcgaggtgaacaagaagaagctggaggagaagcagaag
gagtatgatttcgaggagcgcatgaaggagctgcgggaggaggaggagaaggcaaaggcc
tacaaaaaggagaagcagaaggagaggaagcgacgggcagaggatgacgtggacttcgag
gaggacgatgagatggcggcagtcatgggtttctcaggctttggctcgtccaagaagagt
cactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system