KEGG T04219: IJ21

Paenibacillus sp. 32O-W: IJ21_21400

Entry

IJ21_21400        CDS       T04219

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

pow Paenibacillus sp. 32O-W

Brite

KEGG Orthology (KO) [BR:pow00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pow03032]
    IJ21_21400
   03400 DNA repair and recombination proteins [BR:pow03400]
    IJ21_21400
Enzymes [BR:pow01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     IJ21_21400
DNA replication proteins [BR:pow03032]
Prokaryotic type
  DNA Topoisomerases
   IJ21_21400
DNA repair and recombination proteins [BR:pow03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      IJ21_21400

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim RNA_POL_M_15KD Toprim_4 Auto_anti-p27 Toprim_3

Other DBs

NCBI-ProteinID:

ALS27537

UniProt:

A0A0U2V0R5

Position

2367213..2369303

AA seq 696 aa
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEIENDFQPKYITIRGK
GSVLKELKDARKKVKRVYLAADPDREGEAIAWHLAHYLELEEGENCRVVFNEITKQAVKD
AFKQPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVTVKLIIDREN
EIDAFVPVEYWSITAAMKLGDAAFEAKFYAVGGEKRELGNEQDVQEVLRALEGRPFVVTD
VKEKERLRHPAPPFITSSLQQEAARKLGFRTSKTMSVAQQLYEGVDLGKEGSVGLITYMR
TDSTRISPVAQEEARAYIGEKYGAAYVPEQPRVYTKKNANTQDAHEAIRPTSVLREPETV
KEYMTRDQFRLYKLIWERFVASQMSSAVLDTMTVDLTAGDVTFRAVGSKIKFHGFMKVYV
EGNDDGTEEDDKFLPPLKQGDEVAVSSIEPKQHFTQPPPRYTEARLIRTLEELGIGRPGT
YSPTLETIQKRGYVALEDKKFVPTELGELVIQLMEQFFPEILDVEFTAHMEDDLDHIEEG
KVDWVKVLSSFYKSFEKRLEVAEDEMKEVEIQDEVSDEVCDKCGRPMVYKMGRFGKFLAC
SGFPDCRNTKPIVKEIGVACPQCHEGRVIERRSKKGRIFYGCDRYPACEYVSWDKPAGKP
CPTCETMLVEKRNRSGTRLQCPQCGYTEELPDSEQA

NT seq 2091 nt +upstreamnt +downstreamnt
gtggctgattcacttgtcatcgtcgaatctccggcgaaagccaagacgataggcaaatat
ctgggcagcaaatatatcgtgaaagcctccatgggacatattcgcgatttgccgaagagc
cagatcggcgtcgagatcgagaacgatttccagccgaaatatataacgatccgcggcaaa
ggcagcgtcctgaaggaactgaaggatgcaagaaaaaaagtcaagcgcgtctatctcgcg
gcggaccccgaccgcgagggcgaagcgatcgcctggcatctggcccattacctggagttg
gaggaaggcgaaaactgccgcgtcgtgtttaacgaaattacgaagcaggcggtcaaggac
gcattcaagcagccgcgcaaaatcaatatggatctggtgaacgcgcagcaggcgcggcgc
atactggaccggctggtcggctacaagatcagcccgcttctgtggaagaaagtgaagaag
gggctgtccgccggccgcgtacaatccgttaccgtcaagctcattatcgatcgcgagaac
gagatcgatgctttcgtgccggtcgaatattggtcgatcacggcggcgatgaagctcggc
gacgccgctttcgaggccaaattttacgccgtcggcggcgagaaacgggagctcggcaac
gagcaggacgttcaggaagtgctgcgggcgctggaagggcgtccgttcgtcgtaacggat
gtgaaggagaaggaacgtctgcgccatcccgcgccgcctttcatcacaagctcgctgcag
caggaagcggcgcgcaagctcggcttccggacgtcgaagacgatgtcggtggcgcagcag
ctgtacgaaggcgtcgatttgggcaaggaaggctctgtcggtctcattacatatatgagg
accgactccacccgcatttctcccgttgcgcaggaagaagcgcgcgcctatatcggagaa
aaatacggcgccgcatatgtgccggaacagccgagggtctatacgaagaaaaacgcgaat
acccaggatgcccatgaggcgatccgcccgacctccgtcctgcgcgaaccggaaacggta
aaggaatatatgacccgcgaccagttcaggctgtacaaattgatctgggaacggttcgtg
gcaagccagatgtcttccgccgtgctcgacacgatgaccgtcgatctgacggccggcgac
gttacgttccgcgcggtcggctccaaaatcaaattccacggtttcatgaaagtatacgtg
gagggcaacgacgacggaacggaggaagacgacaagtttctgcccccgctcaagcaaggc
gacgaagtggccgtcagctcgatcgagccgaagcagcattttacgcagccgccgccgcgc
tataccgaggcgcgcctgatccgaacgctcgaggagctcggcatcggtcggccgggcacc
tattcgccgacgctggagacgatccagaagcgggggtatgtggcgctcgaggacaagaaa
ttcgtcccgaccgagctcggcgagctcgtcattcagcttatggaacaattttttccggaa
attctcgacgtggaatttaccgcccatatggaagacgatctcgaccatatcgaagaaggc
aaggtcgattgggtcaaggtgctttcttccttctacaagtcgttcgagaagcggctggaa
gtggccgaggacgagatgaaggaagtcgaaatccaggacgaggtttcggatgaagtatgc
gacaagtgcggccgcccgatggtttacaagatgggacgcttcgggaaatttctggcttgt
tccggatttccggactgccgcaacacgaaaccgatcgtcaaggaaatcggcgtcgcctgt
ccgcaatgccatgaaggccgcgtcatcgagcgccgcagcaagaaagggcgcatcttctac
ggatgcgaccgttatccggcatgcgaatacgtctcatgggacaaaccggcgggcaagccg
tgtccgacatgcgaaacgatgcttgtcgagaagcgcaaccgcagcggaacccggctgcaa
tgcccgcagtgcggctatacggaagaactgcccgatagcgagcaggcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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