KEGG   Onion yellows phytoplasma OY-M: PAM_237
Entry
PAM_237           CDS       T00154                                 
Symbol
truB
Name
(GenBank) pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
poy  Onion yellows phytoplasma OY-M
Brite
KEGG Orthology (KO) [BR:poy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:poy03016]
    PAM_237 (truB)
Enzymes [BR:poy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PAM_237 (truB)
Transfer RNA biogenesis [BR:poy03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PAM_237 (truB)
 Prokaryotic type
    PAM_237 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: BAD04322
UniProt: Q6YQY6
Position
265512..266363
AA seq 283 aa
MNGFFLVNKPEKMTSHDVVFQIKKKFHFDKVGHTGTLDPLASGLLIICVGKATKLAFLFD
KLPKTYQGTFLFNKHYDTLDVTGKLLDTKNTPLTDCNIQKSFASFHQKKYLQIPPMFSAV
KIKGKKMYRLARKNQVVDIPPREVFIHHFEKTSLFCRDQVDFLAHVSKGTYIRSLARDLA
LQLNTYGALLRLQRTAIGTHLLQNAKTIENLELNDLILDSTFFAAYDELILNDYLIKLVK
NGTHLDQRQITTKKPFIVKDSNKNFVAYYDTLDENKYYPRYFF
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaacggattttttttagtcaacaaaccagaaaagatgacatcacatgatgtagttttt
caaattaaaaaaaaatttcattttgacaaagtaggacacacaggaactcttgatccttta
gcctcaggacttttaattatttgtgtgggtaaagccactaaactggcttttttgttcgat
aaactgccaaaaacttatcaaggaacctttctttttaataaacattatgatactttggat
gtgacaggtaaattgttggataccaaaaacacccctttaactgattgtaacatccaaaaa
agttttgcatcttttcatcaaaaaaagtatttgcaaatacctcctatgttttcagcagtt
aaaattaaagggaaaaaaatgtatcgtttagcacgcaaaaatcaagttgtagatattcct
ccaagagaagtttttattcatcattttgaaaaaacatctttgttttgtcgcgaccaagta
gattttttggcacatgtttccaaaggaacttatattagaagtcttgcgcgcgatctagct
ttgcaattaaatacttatggtgctcttcttcgtttgcaaagaactgcaattggcacgcat
ttattacaaaacgctaaaactattgaaaatttagaactcaatgatttgattttggatagt
actttttttgctgcttacgatgaacttattttaaatgattatttaattaagttagtaaaa
aacggtactcatttagaccaaagacaaataactactaaaaaaccttttatagttaaagat
agtaataaaaattttgttgcttattatgataccttggatgaaaataaatactatccgcgt
tattttttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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