KEGG   Onion yellows phytoplasma OY-M: PAM_564
Entry
PAM_564           CDS       T00154                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
poy  Onion yellows phytoplasma OY-M
Pathway
poy03030  DNA replication
poy03430  Mismatch repair
poy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:poy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAM_564 (ssb)
   03430 Mismatch repair
    PAM_564 (ssb)
   03440 Homologous recombination
    PAM_564 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:poy03032]
    PAM_564 (ssb)
   03400 DNA repair and recombination proteins [BR:poy03400]
    PAM_564 (ssb)
   03029 Mitochondrial biogenesis [BR:poy03029]
    PAM_564 (ssb)
DNA replication proteins [BR:poy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PAM_564 (ssb)
DNA repair and recombination proteins [BR:poy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     PAM_564 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    PAM_564 (ssb)
Mitochondrial biogenesis [BR:poy03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    PAM_564 (ssb)
SSDB
Motif
Pfam: SSB tRNA_anti-codon Alpha_kinase tRNA_anti_2 DUF2713
Other DBs
NCBI-ProteinID: BAD04649
UniProt: Q6YQ11
Position
complement(631045..631380)
AA seq 111 aa
MLNNIQLIGRITHDPEKQYINSNNEQIPKIDFQLAVNQTKDKVQYIPCVVFRTQAENFHK
YLHKGSKIYLEGTLSIQKYTNNEGQNKTNTKVIVHKVIFLDNKSQTDNLPF
NT seq 336 nt   +upstreamnt  +downstreamnt
atgttaaataacattcaattaatcggtcgaattacacatgaccccgaaaaacaatacatt
aacagtaataacgaacaaattccaaaaatagattttcaattagctgttaaccaaaccaaa
gacaaagttcaatatattccttgtgtagtttttagaacccaagctgaaaattttcataaa
tacttacataaaggatcgaaaatttatctcgaaggaacattatccatccaaaaatatacc
aacaacgaaggtcaaaataaaacaaatacaaaagtgatcgtacataaagtcatcttttta
gataataaatctcaaactgataatttaccattttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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