KEGG   Komagataella phaffii: PAS_chr1-4_0118
Entry
PAS_chr1-4_0118   CDS       T01092                                 
Name
(RefSeq) DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
ppa  Komagataella phaffii
Pathway
ppa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAS_chr1-4_0118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppa03041]
    PAS_chr1-4_0118
Enzymes [BR:ppa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PAS_chr1-4_0118
Spliceosome [BR:ppa03041]
 Complex C
  Other components
   Step II factors
    PAS_chr1-4_0118
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C S1 HA2_N DEAD AAA_22 ABC_tran nSTAND3 AAA_19 NB-ARC AAA_7 SRP54 TssR_VWA ResIII AAA_30 T2SSE AAA_24 TsaE PhoH
Other DBs
NCBI-GeneID: 8197334
NCBI-ProteinID: XP_002490228
UniProt: C4QXH4
Position
1:1623048..1626065
AA seq 1005 aa
MKLLDLLRSLQPDLSASELDLMEGFISDLYKKSSTLDAFQEVLKENGAEFSVTDIFKIDK
LLDGKWISEPTKPHKQEPPHHTDTNTLYNSQITAHNQERKKKDSINSRLQPIIVGASYSG
QITNITPYGAFIRLQALRRPTGLCHISEMSSSEIRHPLDVANVGDKVTATVLSVSSNKIS
LSLKNPDELQLRGQIQRGRSEVRDTKVRKQLSSPEKWEIRQLISSGALKASDYPELDDEY
QSVLDEHKRGYNDREKDEEVEIVVKQKPPPFLNGKSSSLREISPIRVIKTPEGSLNRSAM
NGSDLLKERKELKKGLRPEISNKVSEWKDSIKKDSYGKTTTKNLQEQRESLPVFSMKQML
LETVKNNKFVVIVGETGSGKTTQITQYLAEEGFNKGNMIIGCTQPRRVAAVSVAKRVSEE
VGCRLGQEVGYTIRFEDNTSDVTKIKYMTDGMLQREAMVDKMLSKYSVIMLDEAHERTIA
TDVLFVLLKTAAMKRDDLKIIVTSATLDSGKFSTYFENCPIIQIPGRTFPVEIFYTKEPE
LDYLQATLECVLSIHKNESRGDILVFLTGQEEIDTCCEVLYEKLIDLHQENELIILPIYS
SLPSEMQSKIFEPTPVGKRKVIIATNIAETSITIDGIYYVIDPGFVKVNAYDPKLGMDSL
MVTPISQAQAKQRAGRAGRTGPGKCFRLYTETGYNKEMLPNSIPEIQRQNLAHTILMLKA
MGVQDLIGFEFMDPPPLKTMLSALEELYNLEALTEDGDLTELGRRMADFPMDPGLAKVLI
KSIEFGCSEEMLSIVSMLSVQSIFYRPTGELRKKADEKRVRFNHPHGDHMTMLNVYEKWV
RNGSSKEWCKDNFIHYRSLLRVRDVRTQLKKIMNKYGSEMRSCGQNSNLIRVNLCCGFFK
NTAKKDSETSCYKTLLENTTVYLHPSSSLFGKSSSEYVIYHTLLLTTKEYMHCVSVIEPT
WLVEQAPRFFAKADTEQVNKRKRTVKIQPLYNRFDQQQSWRLSKR
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgaagttattagatttgttgagatccttgcagccggatttatctgcaagcgagttagat
ttgatggagggatttatatccgacttatacaagaaatcctccactttagacgcatttcaa
gaagttttgaaggagaatggtgccgaattttcagttactgatatcttcaaaatcgacaag
ctactagatggaaagtggataagtgaaccaaccaagccacacaaacaggaaccgccacat
catactgatactaatacgttgtacaatagccaaatcacggctcataaccaagaaagaaag
aaaaaagatagcataaattccaggctccaacctattatagttggggccagttattcagga
cagattactaacataacgccttatggtgctttcatcagattgcaagcattaagaaggccc
actggactttgccatatatcagaaatgtccagttcagaaattagacacccattagatgtg
gctaacgtgggcgataaggtgacagcgaccgtgctgagtgtttcctccaataaaatatcc
ctcagtctcaaaaacccagacgaattgcagctaagaggtcaaatacagagaggtcgatca
gaagttcgggacactaaagttcgaaaacaactatcatccccagaaaaatgggaaattcga
cagttgatatcttccggagctctgaaggcttctgattacccagaactagatgatgaatac
caatcagtcctggatgagcataaacgaggatacaacgatagagagaaggatgaagaagta
gagatcgttgtaaaacagaagcctcccccattcttgaacggtaaatcatcttctctaagg
gagatatcaccgataagggtcataaaaacccctgaaggatctttgaatagatcggcgatg
aatggttctgatttgttgaaggagcgcaaagagttaaagaaaggcctgaggcctgagatc
agcaataaagtctcagaatggaaagactctattaagaaagactcatatggtaaaaccacc
accaagaacctacaagaacaaagggagtctttacctgtattttctatgaagcaaatgcta
ctggaaaccgtcaagaataataaatttgtcgttattgtaggtgagacgggttccggtaag
actacccagattacccaatatttggccgaggaaggatttaataaagggaatatgatcata
ggttgcacccaacctcgacgagttgctgctgtgagtgttgcaaaaagagtatcagaagaa
gttggctgtaggctggggcaggaagttggttatacaataagatttgaagataatacttcg
gatgtaaccaagatcaagtacatgactgacggtatgcttcaaagagaggcaatggttgat
aaaatgcttagtaaatactctgtcattatgctagacgaagctcatgagagaaccattgcg
acggatgttttattcgttctcttaaagacagcagcgatgaaacgagacgaccttaagatc
attgtcacatctgcaacattagacagtggaaagttttccacttactttgaaaactgtcca
ataattcaaattcccggaagaacattcccagtggaaattttctacaccaaggaacctgaa
ctagattacttgcaggcaacattagaatgtgtactgtctatccataagaatgagtcaaga
ggtgacattttagtatttttaacaggtcaagaggaaattgatacatgctgtgaagtgtta
tacgaaaaattaatagatcttcatcaagaaaatgaactgataattttacccatttattct
tctttaccctcagaaatgcagtctaaaatatttgaaccaaccccagttgggaaaagaaaa
gtcattatagccactaacattgcagagacgtctattactattgatggcatatactacgtc
attgatccaggatttgtcaaggtaaatgcttacgacccaaaacttggaatggattcttta
atggtgacacctatatctcaagcacaagcaaagcaaagagctggtagagcaggtagaact
ggaccaggcaaatgcttccgattgtatactgaaaccggatacaataaggaaatgttaccc
aatagtattcctgaaatccaaagacagaatctcgcacatacaattcttatgctaaaggcg
atgggggttcaagacctaattgggtttgagttcatggacccaccgccattaaaaacaatg
ctaagtgcgttggaagaactatacaacttggaggctctgacggaagatggcgacttgaca
gaattgggccgtagaatggcggatttcccaatggatccgggtcttgccaaggttttgatc
aaatccattgaatttgggtgcagtgaggagatgctaagtattgtatctatgttatcagtg
cagtcaatcttctacagacctacgggggaactgagaaaaaaggccgatgaaaaaagagtc
cgatttaaccatcctcatggagaccatatgactatgctaaatgtgtacgagaaatgggta
agaaacggtagctccaaggaatggtgcaaagataacttcattcattataggagtcttctt
cgggtaagggatgttaggacacaactaaaaaaaataatgaacaaatatggttctgagatg
agaagttgtgggcagaatagcaacttgattcgagtaaacttgtgctgtggttttttcaag
aatactgccaaaaaggatagtgaaacatcatgctataagactctattggagaataccaca
gtgtatctccacccctcatcctccttatttggaaaatcatcatcagaatatgtgatttat
cacactctattactgacaacaaaggagtatatgcattgtgtgagtgtaattgaacccact
tggttagttgagcaagctccaaggttcttcgccaaggcggatactgagcaagtaaacaag
agaaaacgaacagtgaaaattcagccgctttataatcgtttcgaccagcaacaaagttgg
agactcagtaagaggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (61)   

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