KEGG   Komagataella phaffii: PAS_chr2-1_0380
Entry
PAS_chr2-1_0380   CDS       T01092                                 
Name
(RefSeq) 60S ribosomal export protein NMD3
  KO
K07562  60S ribosomal export protein NMD3
Organism
ppa  Komagataella phaffii
Pathway
ppa03008  Ribosome biogenesis in eukaryotes
ppa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PAS_chr2-1_0380
   03008 Ribosome biogenesis in eukaryotes
    PAS_chr2-1_0380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppa03009]
    PAS_chr2-1_0380
Ribosome biogenesis [BR:ppa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    PAS_chr2-1_0380
SSDB
Motif
Pfam: NMD3 NMD3_OB NMD_SH3 VPS11_C
Other DBs
NCBI-GeneID: 8199068
NCBI-ProteinID: XP_002491282
UniProt: C4R0H8
Position
2:complement(709187..710707)
AA seq 506 aa
MSNYTHLEPTEQQGVATVLCCNCGVPMDGTTGLVMCYDCIKLTVDITEGIPREANVSFCR
NCERFLQPPGQWIRAELESRELLALCLRRLKGLNKVRLIDASFIWTEPHSRRIKVKLTVQ
GEAMTNTIIQQSFEVEYVVMAMQCPDCAKSFTANTWRAAVQVRQKVPHKRTFLHLEQLIL
KHNAHVDTISIKEAKDGLDFYYAQKNHAAKMIDFISSVAPVKSKKSEELVSADIHSGTST
YKFTFSVEIVPICRDDLIVLPKKLAHSLGTISRLVVCSKVSNTVQFIDPNTLQIADINSN
VYFRDPFPVLCNRTELIEFIVLDVEPTGETRGNYILADITVARAADMGNNDQEYYVRSHL
GGLLNPGDSADGYFLANSNFNSDLFDELDSKNVLDVVLIKKHFSRSARRAKKRAWRLRRM
AKEHQDIVANDESRQAKQEQEKAERDYEIFLQELEEDPELRQTVNLYKADEPPAPENEAD
MDEDDDAPEIGVDELLDELDEMTLDE
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgtcaaactatactcatctcgagcctaccgagcaacaaggtgttgctacggtgctatgt
tgcaactgtggtgttcccatggatggtaccactggtctagtcatgtgttacgactgtata
aaacttacagttgatatcaccgaaggaattccaagggaggcaaatgtgtcgttctgtagg
aactgtgaacgttttttgcaacctccaggacagtggatccgtgcagaattagaaagtaga
gagcttttggctttgtgtctcaggaggttgaaaggtttgaataaggtcagattgattgat
gcttcctttatctggacagagcctcactctagaagaatcaaagttaaactaacagttcag
ggtgaggctatgacaaacactattattcagcaaagctttgaagttgaatatgttgtaatg
gcaatgcaatgtcctgactgtgccaaatcatttactgctaatacgtggagagccgctgtt
caggttcgtcaaaaagttcctcacaaaagaaccttcttgcacttggaacagttgattcta
aagcataatgctcatgttgataccatttctattaaggaggccaaggatggtctggacttc
tactacgcacagaaaaaccacgctgccaagatgattgactttatcagttccgtggcccct
gtcaaatccaaaaaatctgaagaacttgtgagtgcagatattcattcaggaacctctacg
tataagtttactttttctgttgaaattgtacccatctgtagagatgacttaattgttctt
ccaaaaaagttagcacattccttaggaactatctccagactggtagtttgctccaaagtt
tcgaatacagttcaatttattgatccaaacacattacaaatagcagacataaactccaac
gtttacttcagagatcctttcccagttctgtgcaacagaacagagttaattgaattcatt
gtgctcgatgttgaacctactggagagaccagaggaaactatattcttgctgatattacc
gtagcaagagcagcagacatgggtaacaatgatcaagaatactatgtaagatcgcatctt
ggtggcttactgaatcctggagattctgcggatggatactttttggctaattcgaacttc
aacagtgacctttttgatgaattagacagcaagaatgtactagatgtagttctgatcaag
aaacacttctccagaagtgcaagaagagctaagaagagagcttggagacttagaagaatg
gcgaaggaacaccaggatattgtcgctaatgacgaatctagacaagctaaacaagagcaa
gagaaggctgaaagagattacgagatctttttgcaggaattggaggaagatccagaactt
agacaaaccgttaatctttataaggctgatgagccaccagctccagaaaatgaggctgac
atggatgaagatgacgatgcccctgaaattggtgttgatgagttattagatgagcttgat
gagatgactctagatgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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