KEGG   Komagataella phaffii: PAS_chr4_0194
Entry
PAS_chr4_0194     CDS       T01092                                 
Name
(RefSeq) Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex
  KO
K12613  mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
Organism
ppa  Komagataella phaffii
Pathway
ppa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAS_chr4_0194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppa03019]
    PAS_chr4_0194
Enzymes [BR:ppa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     PAS_chr4_0194
Messenger RNA biogenesis [BR:ppa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PAS_chr4_0194
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     PAS_chr4_0194
SSDB
Motif
Pfam: DCP2 NUDIX GIDA_C_1st
Other DBs
NCBI-GeneID: 8201101
NCBI-ProteinID: XP_002493598
UniProt: C4R744
Position
4:397051..399768
AA seq 905 aa
MSIQLRDGFINESQDKVLEDLLVRFVVNCPPEDLSSIERVFFQIEEAQWFYTDFVRQLNP
QLKNLSMKTFSQKIIEKCPLIWRWGNPEDALVRFGKYKSTIPVRGCALFNSDYTKLLLVQ
GYQSKSWGFPRGKISKAESDLTCALRELKEETGFDASNYIDENEYIERTIKGKNYRIYLV
SDVPEDTPFEPLVRNEISDIQWKDVKKLSVACKNSNKLFLVDAMIKPILNFIKRKTSSED
YLKQKATFELSSLLGIGEEEETADYGRELMNIIQQMVLKDKSQSNAPQKEISSQQYPHPQ
PNFPDISNTNINNSVPIPVFPNFPFIQNLPPQQIPAFMNGQLPPLPFLAQPFPYIPGGMP
PTAMFPPAMPQQQQQQQPNGPPFVPQDTGPKPETFNRPTFYRSKEADASQLLDILRNPAP
SPAPPSATQTESKNSAELLSILKQPNSNTANLTENTMKQFNKDVSSTPKEQSEILLKYLN
ESSTDRNSIPTRVPSTPPTTGATSSKNRIRILKRGTALDDLSTRTVEQGSHIDESFMKEV
SFNSDNRQNDNSSTSSKTISRIAPSKRGTDAPKSPFLNGPSVPQITQSGNDNDDDEFGDF
NQLHEQHYSENDSQIDLYEGLDSDMDEYVPPPKVQAASVVQSISASKNAIQPSDVNKCKK
SKEKKEAQVAVEPVKARKKITILKKGDSLEELLRRSNEGTPEPQSFKPTEASVDLDATKD
LTNILFQKSQSNENQSAEPPKEQPLKSNPIPQPNGNSGSQLGLLGLVKQNTALNGNSSEL
LDMLKRPSFREESPAKSNGSSELLDILQRREPSIPPTEPPAPANSSLELLSILKSPDQQK
KSEDSSELLSVLKGNVQDNEPVINNEIRKETSNGSSELLGILKGNSSSSAELLGMLKGSN
SVAHI
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgagtattcaattgcgagatggattcataaatgaatcacaggataaagttttagaggat
ctgcttgtcagattcgttgttaattgtccaccagaagatctctccagcatcgaaagagta
ttcttccagatagaagaagctcagtggttttatacagattttgtcagacagctaaaccca
caactgaagaacctctctatgaagactttctcccaaaagattatagaaaaatgtcccttg
atttggcgctggggcaacccagaagatgctttggtcagatttggaaagtacaagtccacc
atcccagtcagaggttgtgcgctgttcaacagtgattataccaaactcctactagttcaa
ggttatcagtccaaaagctggggatttcccagaggtaaaatttccaaggcagagtccgat
ttaacgtgtgcattgagagaattgaaagaagaaacaggttttgatgcctctaattacatt
gatgaaaatgaatatattgaacgaacaattaaaggaaaaaattatagaatttatttggtc
agcgatgtgccagaggatactccatttgaacctctggtaagaaatgaaatctctgacata
caatggaaagacgtaaagaaactttcagtggcttgcaagaattccaacaagcttttttta
gtggatgctatgataaaacccatcctcaactttataaagcggaagacttcaagtgaagat
tatttaaagcaaaaagctaccttcgagttatcaagtctcttgggtattggggaggaagag
gagactgccgattatggtagggagctaatgaatattattcaacaaatggttctaaaagac
aaatcacagtcgaatgctccacagaaagaaatatcatctcaacagtacccacatccacag
ccaaacttccccgatatcagcaacaccaacatcaacaactctgttcccattccagttttc
cccaatttccctttcattcagaatcttccccctcagcaaatacccgctttcatgaatggt
cagctacctcctttaccatttttggctcagcctttcccatacattccaggaggaatgcct
cccacagcaatgttcccacccgccatgcctcaacagcagcagcagcagcagcctaatgga
cctccttttgtcccacaagatactgggcctaaaccagaaactttcaacagaccaacattt
tataggtcgaaagaagccgatgcctctcaactgctggacattttacgaaaccctgcacca
tcaccagctccaccatcagcaactcaaaccgaatccaagaattctgctgaacttctgagt
attttgaaacaacctaattccaacaccgctaatttgaccgaaaatactatgaagcaattt
aataaggatgtaagctcaacgccaaaggaacagagtgaaatattactcaaatacttgaac
gaatcgtccacagaccgaaatagtattcctaccagagttccctcaacgcctcccacaaca
ggcgccacttcttcgaagaacagaatacgcatcttgaagcgtggtactgcgctcgacgac
ctatcaactcgtactgttgaacaaggtagtcatattgatgaaagctttatgaaagaggta
tcattcaattccgacaacagacaaaatgataatagttctacatcttccaaaacaatatca
agaattgcaccgtcgaagagaggaacggatgcacccaagtcacccttcttgaacggcccc
tcagttccacagataacacaatcaggaaatgataatgacgatgatgaattcggtgacttc
aatcaactccatgaacaacactatagtgaaaatgattcccaaatagatttgtatgaagga
cttgattccgatatggacgaatacgttccacctccaaaagttcaagccgcatctgttgtt
caatctatctcagcatctaagaatgctattcagccatcagacgtgaataaatgtaagaaa
tccaaagaaaagaaagaagctcaagttgctgttgaacctgtaaaagctagaaaaaagatt
actattctcaaaaaaggagattcattagaagaacttcttagaaggtcaaacgaaggaacg
ccagaacctcaaagtttcaaaccaactgaagcatcagttgatctggatgctaccaaagat
ttgacaaacatcttgtttcaaaagtctcaatccaatgagaaccaatcggccgagcctcca
aaagaacagccactcaagtcaaatccaatcccgcaacccaatggcaactctggcagccaa
cttgggttacttggacttgtaaagcagaacactgcattgaatggaaatagctccgaactt
ttagatatgctgaaacgcccaagcttccgggaagaatcaccggccaaaagcaatggatca
tctgaactgttggacattctacagagaagagaaccctccatcccaccaacagaaccaccg
gctcctgcgaatagcagtttggagcttttaagtattctcaaaagccccgaccaacaaaag
aaatcagaagacagttccgagttgttgagtgttttgaaaggcaacgttcaagataatgag
cctgttattaataatgaaattcgcaaggaaacttccaacggaagctctgaactacttgga
attttgaaagggaactcatctagtagtgccgagttgctcggtatgcttaagggttccaac
tctgtagcccacatatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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