KEGG   Komagataella phaffii: PAS_chr4_0587
Entry
PAS_chr4_0587     CDS       T01092                                 
Name
(RefSeq) Mitochondrial serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ppa  Komagataella phaffii
Pathway
ppa00260  Glycine, serine and threonine metabolism
ppa00460  Cyanoamino acid metabolism
ppa00630  Glyoxylate and dicarboxylate metabolism
ppa00670  One carbon pool by folate
ppa00680  Methane metabolism
ppa01100  Metabolic pathways
ppa01110  Biosynthesis of secondary metabolites
ppa01200  Carbon metabolism
ppa01230  Biosynthesis of amino acids
ppa01240  Biosynthesis of cofactors
Module
ppa_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PAS_chr4_0587
  09102 Energy metabolism
   00680 Methane metabolism
    PAS_chr4_0587
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PAS_chr4_0587
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PAS_chr4_0587
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PAS_chr4_0587
Enzymes [BR:ppa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PAS_chr4_0587
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 8200852
NCBI-ProteinID: XP_002494026
UniProt: C4R8C2
Position
4:1148331..1149824
AA seq 497 aa
MLKCLSRNLQRQPVIRQRSAPAAVLLRAYAIDTNSQALVSKPVQEIDPEMAQILEGEKQR
QKHSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEWIDKAESLCQKRALEA
FELDPAQWGVNVQPLSGAPANLYAYSAVLEVGDRLMGLDLPHGGHLSHGYQTNATKISYI
SKYFQTMPYRLDENTGLIDYDALETSAVLFRPKVIVAGASAYARTIDYKRMREIADKVGA
YLLSDMAHISGLVSAKVTESPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKGKEI
PYELERKINFSVFPAHQGGPHNHTISALAVALKQTQTPEFVSYQQAVVDNSKSFAESFIK
RGFQLVSGGTDTHLILVDLRNKKIDGARVENVLEKINIAANKNTVPGDVSALFPSGLRVG
TPAMTTRGFTAADFDRVAGYFEKAVAIAIDLKSGEKGSLAKEKLASFKSLAEDSAEIKKL
AQEVSEWASTFPVPGEL
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgttgaagtgtcttagtcgtaacctgcaaaggcagcctgtcatcaggcaaagaagtgct
cccgcggctgtgttgctgcgtgcttacgccattgacaccaactctcaagcgttagtttcg
aagcctgtacaggagattgaccctgagatggcacaaatcttggaaggagagaaacaacgt
cagaagcactcaattactttaattccttccgaaaattttacctccaaggctgtcatggat
ttgttgggatcagagatgcaaaataagtactccgagggatacccaggcgaacgttactat
ggtggtaacgaatggatagacaaggcagaaagtctttgccagaaacgtgccttggaggca
tttgagttagaccctgctcaatggggtgtcaatgttcaaccattatctggggctccagct
aatttgtatgcttactcagccgttctagaagttggagaccgtttaatgggattggatctg
cctcatggtggtcatttgtcccatggttaccaaacaaacgctaccaagatctcttatatt
tccaagtactttcagaccatgccttacagattggatgaaaatacgggattaatcgactat
gatgccttagaaaccagtgcagttttgttccgtcctaaagttatagtagctggtgcttcc
gcttatgctcgtactattgattacaaacgtatgcgagaaatcgctgacaaagtcggtgcc
tatttgttatctgatatggctcatatttcaggattggtatctgcaaaagttacggaatcc
ccattcccttactccgacattgtcactaccaccactcacaagtccctacgtggacctagg
ggtgccatgattttcttccgaaagggtatacggaaggtgaccaagaagggcaaggagatt
ccatatgagcttgagcgtaagatcaatttctctgtgtttccagctcatcagggaggacca
cacaaccacaccatctctgctcttgctgtggctctgaaacagacccaaactccagaattt
gtttcctaccaacaagctgtggtggacaactctaagtcatttgctgaatcgttcataaag
agaggatttcagttggtgtctggaggaacggacactcatttgatcttggttgatctacga
aacaagaagattgacggtgcacgtgttgagaatgtcttggagaagatcaacattgctgcc
aacaagaacactgtaccaggcgatgtttcggctttatttccttcgggattaagagttgga
actcctgcaatgacaaccagaggatttactgcagcagattttgaccgtgtcgcaggttac
tttgaaaaagcagtcgcaattgctattgacctcaaatccggagaaaagggatctttggcg
aaggaaaagctggctagtttcaagagtctcgccgaagacagtgcggaaatcaagaagctg
gcccaagaagtcagtgaatgggcttctacatttcctgttccgggggaattgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (10)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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