KEGG   Palaeococcus pacificus: PAP_09155
Entry
PAP_09155         CDS       T03210                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
ppac  Palaeococcus pacificus
Pathway
ppac03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PAP_09155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppac03021]
    PAP_09155
Transcription machinery [BR:ppac03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     PAP_09155
 Prokaryotic type
  Archaeal type
    TFE
     PAP_09155
SSDB
Motif
Pfam: TFIIE_alpha Rad50_zn_hook HTH_9 Sigma70_r3 Enkurin Phage_rep_org_N TrmB TF_Zn_Ribbon RlmA_N Trimer_CC HTH_24
Other DBs
NCBI-ProteinID: AIF70209
UniProt: A0A075LV66
Position
complement(1647769..1648284)
AA seq 171 aa
MARRKGRKELLELAMDMGGEEAVAVIKALEKKGEATDEELAEATEIRVNTVRKILYMLYD
TKLADFKRIRDKETGWYYYYWRLETKRLPEILRARKMEELRQLKKMLEEETQEVYYHCGT
IGHPKLTFDEALEYEFQCPICGAMLQEYDNSAIVKDLQKRIQELEKELGLA
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcaagaagaaaaggcagaaaggaattgcttgagcttgcaatggatatgggtggcgaa
gaagcggtagcagtcataaaagcccttgaaaaaaagggtgaagctactgatgaagagtta
gctgaagctacggagattagagtgaatactgttcgtaaaatactttatatgctctatgac
actaaattggcagacttcaagcggattagggacaaagaaacgggatggtactattattac
tggcgtttagaaactaagcgcttacctgaaattctcagggctagaaagatggaggagctg
agacagctcaaaaaaatgcttgaagaggagactcaagaggtttattaccactgtgggact
ataggacatccaaagctcacttttgatgaagctttggagtatgaattccaatgcccaatc
tgcggtgcaatgctccaagagtacgataattctgccattgttaaagatcttcaaaaaagg
attcaggaacttgaaaaagaactcggcttggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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