KEGG   Panthera pardus (leopard): 109277442
Entry
109277442         CDS       T06062                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ppad  Panthera pardus (leopard)
Pathway
ppad03013  Nucleocytoplasmic transport
ppad05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ppad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109277442 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    109277442 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppad03019]
    109277442 (NUP54)
Messenger RNA biogenesis [BR:ppad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109277442 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 109277442
NCBI-ProteinID: XP_019322652
Ensembl: ENSPPRG00000024312
UniProt: A0A9V1GHR9
Position
Unknown
AA seq 562 aa
MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAVGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGVFS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattggcaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcagttgggtttgga
ggatttgggacaacatctacaacagctggttctgcattcagcttttctgctccagctaac
acaggcactactggactcttcggtggtactcagaacaaagggtttggatttggtactggt
tttggcacaacaactggaagtagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcagcagcaacagcaaactacattaggtggtctcttcagt
cagcctacacaagctcctacccagtccaaccaactgataaatactgcaagtgctctttct
gctccaacactgttgggagatgagagggatgctattttggcaaaatggaatcagctgcag
gccttttggggaacaggaaaaggatatttcaacaacaacattccaccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggttatagttgtatgcccaataataaa
gacgaagatgggctagtggttttagttttcaacaaaaaagaaacagatattcgaagccag
caacagcagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggtattaaaacactgccagatgatcagacggaagttgtcatttatgttgtt
gagcgttctccaaatggtacttcaagaagagttccagctacaacactatatgcccatttt
gaacaaactaatataaaaacacagttgcagcaacttggtgtaaccctttctatgactaga
acagaactttctccagcacagatcaaacaacttttacagaatcctcctgctggtgttgat
cctattatttgggaacaagccaaggtagataatcctgattctgaaaagttaattccggta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagatcagatgactaag
caacatcagaccagattagatatcatatctgaagatattagcgaattacagaagaatcaa
accacaactatggccaaaattgcacaatacaagaggaaactcatggacctttcccacaga
actttacaggtcctaatcaaacaggaaattcagaggaagagtgggtatgccattcaagct
gatgaagagcagttgcgagttcagctagatacaattcagtgtgaactgaatgcacctacc
cagtttaagggccgactaaatgaactgatgtcccaaatcaggatgcagaatcattttgga
gcagtcaaatctgaggaaagatattacatagatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccatttgattagcatcataaaagatgaccta
gaagatataaagttggtagaacatggattgaatgaaaccatccacatcagaggtggtgtc
tttagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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