KEGG   Paracoccus pantotrophus: ESD82_00195
Entry
ESD82_00195       CDS       T06495                                 
Name
(GenBank) 2'-5' RNA ligase family protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ppan  Paracoccus pantotrophus
Brite
KEGG Orthology (KO) [BR:ppan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppan03016]
    ESD82_00195
Enzymes [BR:ppan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     ESD82_00195
Transfer RNA biogenesis [BR:ppan03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    ESD82_00195
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: QFG34695
Position
2:complement(34991..35560)
AA seq 189 aa
MQDAAQAQDMQQETPREHFLLFVAIPPPEVAARIEDAWRLANRRDRFRRATLHMTILPVI
RTPQLAPGMAEALGRPLDGLDFPAFDLVLDRLTTFGPPRRRDRPLVLVGRQEHPAPDALC
QALWRRLAHAGLAVARHRVTPHVTLAYGKPLPPEGIAVPPVHWRVDELVLIDSLQGLGRH
VPLARWPLP
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcaagacgccgcgcaagcgcaggacatgcagcaggaaacgccgcgcgagcatttcctg
cttttcgtcgccatcccgccgcccgaggtcgcggcacggatcgaggatgcctggcggctc
gcgaaccgccgcgaccgcttccgccgcgccacgctgcacatgaccatcctgccggtgatc
cgcaccccgcagctggcgccgggcatggccgaggcgcttggccggccgctggacgggctc
gacttccccgccttcgacctggtgctggaccggctgaccaccttcggcccgccgcgccgg
cgcgaccggccgctggtgctggtcggccggcaggaacaccccgcccccgacgcgctgtgc
caggcgctctggcggcgcctcgcccatgccggcctggccgtcgcccgccaccgcgtcacc
ccgcatgtgacgctggcctatggcaaacccctgccgcccgagggcatcgccgtgccgccc
gtgcattggcgcgtggacgagctggtgctgatcgacagcctgcaggggctgggccggcat
gttccgctggcgcgctggccgctgccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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