KEGG   Paracoccus pantotrophus: ESD82_21390
Entry
ESD82_21390       CDS       T06495                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppan  Paracoccus pantotrophus
Brite
KEGG Orthology (KO) [BR:ppan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppan03021]
    ESD82_21390
Transcription machinery [BR:ppan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ESD82_21390
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF DUF134 Xre-like-HTH HTH_23 DUF6291
Other DBs
NCBI-ProteinID: QFG38557
Position
1:2198335..2198928
AA seq 197 aa
MTDRKPARTARPQDHGDPRDELVDHLPALRAFALSLTREGASADDLVQDTIVKAWTHIDK
FQPGTNLRAWLFTILRNTFYSARRKTRREISDTDGLHAARQAARPEHDGRLALNDFRTAF
EQLPDEQREALILVGASGFSYEEAAAMTGVAVGTVKSRANRGRRKLAELLHLEEGEELEM
TDRATLAVMAQNTPILR
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaccgatcggaaaccggcgcggacggcccgcccccaggaccacggcgatccgcgggac
gaactggtcgatcacctgccggcgctgcgcgccttcgctttgtcgctcacgcgcgagggg
gcctcggccgacgatctggtgcaggacaccatcgtcaaggcctggacccatatcgacaag
ttccagcccggcaccaacctgcgcgcctggctgttcaccatcctgcgcaacaccttctat
tccgcccgccgcaagacccggcgcgagatcagcgataccgacggtctccacgccgcccgc
caggccgcgcggccggaacatgacggccggctggcgctgaacgatttccgcaccgccttc
gagcaattgcccgacgagcagcgcgaggcgctgatccttgtcggcgcttcgggcttttcc
tatgaggaagcggcggcgatgaccggtgttgccgtgggcaccgtcaagtcgcgtgccaat
cgcggccggcgcaagctggccgagcttctgcacctggaagagggcgaggaactggagatg
accgaccgtgccacgctggcggtgatggcgcagaacaccccgatcctgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

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