KEGG T04513: A8F97

Pectobacterium parmentieri RNS08.42.1A: A8F97_12210

Entry

A8F97_12210       CDS       T04513

Name

(GenBank) RNA degradosome polyphosphate kinase

K00937

polyphosphate kinase [EC:2.7.4.1]

Organism

ppar Pectobacterium parmentieri RNS08.42.1A

Pathway

ppar00190

Oxidative phosphorylation

ppar03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:ppar00001]
09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    A8F97_12210
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A8F97_12210
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppar03019]
    A8F97_12210
Enzymes [BR:ppar01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.1  ATP-polyphosphate phosphotransferase
     A8F97_12210
Messenger RNA biogenesis [BR:ppar03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     A8F97_12210

SSDB

Motif

Pfam:

PP_kinase_C_1 PP_kinase_C PP_kinase PP_kinase_N PLDc_2 EAL

Other DBs

NCBI-ProteinID:

AOR59663

UniProt:

A0A0H3I0W8

Position

2682936..2685008

AA seq 690 aa
MGQDKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSSNLDEFYKVRFADLKRR
ILINEEQGLDGNLRHLLGKIQARVLKTDQLFDSLYNELLLEMARNQIFLVNERQVSPNQQ
EWLRDYFRQYLRPHITPILIFNETNLVEFLKDNYTYLAVEIIRGDAISYALLEIPSDKIP
RFVNLPAEAPRRRKTMILIDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVTEME
SSLLELMSSSLKQRLTAEPVRFVYQRDMPDAMVTMLQEKLGISSFDSVIPGGRYHNFKDF
ISFPNVGRANLVNKPLPRLRHTGFNHFRNGFDAIRERDILLYYPYHTFEHVLELLRQASF
DPSVLSIKINIYRVAKDSRIITSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSVPGLKIHAKLFLISRREGENIVRYAHIGTGNFNEKTARLYTDYSLLTADERITN
EVRRVFNFIENPYRPVSFEHLLVSPQNSRDKLYQLIDTETKNALANRDAGITLKVNNLVD
KGLAEKLYQASSAGVKINLLVRGMCSLIPNLPGISENIQVISILDRYLEHDRVYVFNNGG
DKKVYLSSADWMTRNIDYRIEVAVEILDPILKNRVLETLDILFSDTVKARVIDKESSNRY
VSRGNKRKVRAQNAIYDYIKALEQPGDKPE

NT seq 2073 nt +upstreamnt +downstreamnt
atgggtcaggacaaactctatatagagaaagaattaagttggttatcctttaatgagcga
gtacttcaggaagcagcggataaaagcaatccattaatcgaacgcatgcgctttctgggc
atttactccagcaaccttgatgaattttataaagtccgttttgccgacttgaaaagacgc
attctgattaacgaagaacaaggtctggacggcaatctgcggcatcttttaggcaaaatt
caggcgcgtgtactaaaaaccgatcaactctttgacagcttgtataacgaactgctgctg
gagatggcgcgtaaccaaatttttctggtcaacgaacgtcaggtttcccctaatcagcag
gagtggctgagggattactttcggcaatatctgcgcccgcacatcacgccaatactgatc
tttaacgaaaccaatttggtggagttcctgaaggataactacacctatctggccgtcgaa
atcattcgtggcgatgcgatcagttatgccctgctggaaattccttcggataaaataccg
cgtttcgtcaacctgcctgcggaagcgccgcgtcgccgtaagaccatgatccttatagat
aacattctgcgttactgtcttgatgatatcttcaagggcttctttgattatgatgcgctg
aacgcgtattccatgaagatgacgcgcgatgcggaatacgatctggtcacggaaatggaa
tccagcctgttggagttgatgtcctccagcctgaaacagcgcttaaccgccgaaccggtg
agattcgtctatcagcgtgacatgccggacgcgatggtcacgatgctacaagagaaactg
gggatttcatcctttgactccgtgatccccggcgggcgttatcataatttcaaagatttt
atttctttcccgaacgttggacgcgccaatctggtcaacaaaccgttgcctcgcctgcgg
cacacgggattcaaccattttcgcaacgggtttgatgcgatccgcgaacgtgacatcctg
ctctattatccgtaccacacctttgaacatgtgctggagttgctgaggcaggcctctttc
gatcccagcgtgttgtccatcaaaatcaatatttaccgcgtcgccaaggactcacgcatc
ataacctcgatgattcatgcggcgcacaacggcaagaaagttacggtggtcgtggaacta
caggcacgctttgacgaagaagcgaatatccactgggccaagcgtctgaccgaagctggc
gtacacgtcattttctcggtacccgggctgaagatacatgccaagctgtttcttatttcc
cgtcgtgaaggggaaaacatcgtgcgttacgcacatataggcaccggtaacttcaacgaa
aaaaccgcccgtctgtataccgactattcgctgctgaccgccgatgaacgcattaccaac
gaagtccgtcgcgtcttcaacttcattgaaaacccttaccgtccggtcagtttcgagcac
ctcctggtgtcaccacaaaactcccgcgacaaactttaccaactgatcgataccgagacc
aaaaacgcgctggctaatcgtgatgcaggcattacgcttaaggtaaataatctggtggat
aaagggctggcggaaaagctgtatcaggcttcctctgcgggcgtgaagattaacctgctg
gtacgcggcatgtgctcattgatccctaatctgccggggatcagtgaaaatattcaggtc
atcagtattcttgaccgctatctggaacacgatcgggtgtatgtcttcaacaacggtggg
gacaaaaaagtctacctctcctccgccgactggatgacccgtaatattgattatcgcatt
gaagtcgcagtggaaatccttgatcccattttgaaaaaccgcgtactggaaacactggat
attctgttcagcgacacggtgaaagcccgcgtcattgataaagagtcgagcaaccgctat
gtatcacgcggcaacaagcgtaaagtacgcgcgcaaaatgccatttacgactacatcaag
gcgttggagcaacctggagataagcctgaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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