KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_15050
Entry
A8F97_15050       CDS       T04513                                 
Name
(GenBank) mismatch-specific DNA-glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A8F97_15050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppar03400]
    A8F97_15050
Enzymes [BR:ppar01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     A8F97_15050
DNA repair and recombination proteins [BR:ppar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A8F97_15050
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AOR60202
UniProt: A0A8B3F6F1
Position
complement(3317735..3318238)
AA seq 167 aa
MITDILAMNLQVVFCGINPGLSTAHHGYHFANPSNRFWKVIHQAGFTERLLTPAEEQHLL
DTGCGITMLVERPTVEATELGRDELLQGGNTIVEKMTRYQPRVLAVLGKQAFSQAFGIKK
VSWGRQALRVGETQVWVLPNPSGLNRATLEALVASYQELHQALQDRA
NT seq 504 nt   +upstreamnt  +downstreamnt
atgattaccgatattctggcaatgaatcttcaggttgttttttgtggtattaaccctggg
ctgtcgacggcccatcacggttatcatttcgcgaatcccagtaatcgcttctggaaagtg
attcatcaggcgggtttcaccgaacgtttgctgacacctgcggaagaacagcatctgctg
gacacgggatgcggcatcaccatgctagtggagcgtccaacggttgaagcaacggagctg
gggagagatgagctgctgcaaggtggaaatacgattgttgagaagatgacgcgctatcag
ccgcgtgtcttggccgtgctggggaagcaggcgttcagtcaggcgtttggtatcaaaaag
gtttcatgggggcgtcaggcgctacgtgttggcgagacacaggtttgggttctgccgaac
cctagcgggcttaatcgcgcgacgttagaggcgttggtggcgtcatatcaggaactgcat
caggcattgcaggatagagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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