KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_21300
Entry
A8F97_21300       CDS       T04513                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar00040  Pentose and glucuronate interconversions
ppar01100  Metabolic pathways
ppar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    A8F97_21300
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A8F97_21300
Enzymes [BR:ppar01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     A8F97_21300
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: AOR61396
UniProt: A0A0H3I8E4
Position
complement(4700203..4701327)
AA seq 374 aa
MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIINLIEEAQLD
SKGKKVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGLTILGTNGS
SANFGIWLVNSSNVVVRNMRFGYMPGGAKDGDAVRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRL
PLQRGGQVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYKITWGKPSTPHINADDWKSTGKFPAVPYSYSPVSAQCVKDKLANYAG
VGKNQAVLTAANCK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaaatacctactgccttctgcagccgctgggctgttgctgctcgcagcccaaccgaca
atggcggcaaacacgggaggttatgccaccactgacggcggcgatgtttccggcgcggtg
aagaaaaccgcacgttctctgcaagaaatcattaatctcatcgaagaagcgcaactggat
tctaaaggtaagaaagtcaaaggcggcgcttatccgctcgtcatcacctataacggtaat
gaagatgcattgatcaaagcggctgaagccaatatctgtggccaatggagcaaagatccg
cgcggtgtagaaatcaaagagtttaccaaagggctcaccatccttggtaccaatggctct
tccgccaatttcggtatctggctggttaactcttccaacgttgtcgtgcgcaacatgcgc
ttcggctacatgccgggtggagcaaaagatggcgatgccgtccgtatcgacaactcaccg
aacgtctggatcgaccacaacgagatcttcgctaagaatttcgaatgtgctggtacgcca
gacaacgacaccacttttgaatcggctgtcgatatcaagaaagggtcaaccaacgtcacc
gtatcgtacaactatatccacggcgtgaaaaaggtaggtttgagcggttcaagcaacacg
gacaccggccgtaacctgacttaccatcacaatatttacagcgatgttaactcacgtctg
ccgctgcaacgtggtggtcaggtacatgcttataacaacctgtatgacggcatcaaaagc
tcaggctttaacgtccgtcagaaggggattgcgctgatcgaaagcaactggttcgaaaat
gcactcaacccagtaactgcacgtaatgacgattccaacttcggtacctgggaactccgt
aacaacaacattaccagcccatctgattttgctaaatacaagatcacttggggtaaaccg
tctaccccgcacatcaatgcggatgactggaaaagcaccggtaaattcccagccgtaccg
tatagctactctcctgtttccgcacagtgcgtgaaggataaactggcgaactatgctggc
gtaggtaaaaaccaggcagtactgacagcagccaactgtaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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