KEGG   Pectobacterium parmentieri RNS08.42.1A: A8F97_22615
Entry
A8F97_22615       CDS       T04513                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppar  Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar00470  D-Amino acid metabolism
ppar00550  Peptidoglycan biosynthesis
ppar01100  Metabolic pathways
ppar01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A8F97_22615 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A8F97_22615 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    A8F97_22615 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppar01011]
    A8F97_22615 (ddl)
Enzymes [BR:ppar01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     A8F97_22615 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:ppar01011]
 Precursor biosynthesis
  Amino acid ligase
   A8F97_22615 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 TTL ATPgrasp_ST ATP-grasp ATP-grasp_3 RimK ATPgrasp_YheCD GARS_A
Other DBs
NCBI-ProteinID: AOR61650
UniProt: A0A0H3IAE2
Position
4975510..4976430
AA seq 306 aa
MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTKLKEDGFTRVFI
ALHGRGGEDGTLQGVLEFLELPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
HYSETAANELLAKFTHLGLPLIVKPSREGSSVGMSKVNALSELPAALEEAFRHDDDVLVE
KWLSGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAVL
AMAAYRAVDCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq 921 nt   +upstreamnt  +downstreamnt
atgactgagaaagttgctgtattgcttggtggaacctctgctgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggactgaaagaagcgggcatcaatgcacatgcggtc
gatacccgtgacttccccgtgacgaaattgaaggaagacggttttacccgcgtattcatc
gccttacatggtcgtggtggtgaagatggcacattgcagggcgtgctggaatttctggaa
ttaccctataccggcagcggcgtgatggcatccgcactgacgatggataagctccgtacc
aagcaggtgtggcaagcggtcggattaccagtatcgccttacgtggcactggatcgtcgc
cactattcggagacggcggcaaatgaattgctggcgaaattcacgcatctcggattgcca
ctgattgtcaaaccaagccgtgaaggttccagcgtcggcatgagcaaagtgaatgcgctt
agtgagttgcctgcggcactggaagaagcattccgtcatgatgacgatgttctggtcgag
aaatggctgagtggcccagagtataccgttgctattctgggggatgaggtattgccgtct
attcgcatccagcctgcggggacgttttacgactatgaagcgaagtatttgtcggacgat
acccagtatttctgtccaagtggcctgccggacgatcaagagcaggcgttagcggtactg
gcgatggcggcttaccgtgcggtggactgtagcggatggggacgcgtcgattttatgtta
gatagcgacggtgctttctacctgcttgaagtgaatacgtctccagggatgacgagtcac
agcctggttcctatggcggcgcgtcaacgtggtctgactttttcacaattggtcgtgaaa
attctggagcttgctggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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