KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_3944
Entry
PPUBIRD1_3944     CDS       T01975                                 
Symbol
cobB
Name
(GenBank) CobB
  KO
K02224  cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00860  Porphyrin metabolism
ppb01100  Metabolic pathways
ppb01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    PPUBIRD1_3944 (cobB)
Enzymes [BR:ppb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.9  hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
     PPUBIRD1_3944 (cobB)
    6.3.5.11  cobyrinate a,c-diamide synthase
     PPUBIRD1_3944 (cobB)
SSDB
Motif
Pfam: GATase_3 CbiA AAA_26 DJ-1_PfpI SNO
Other DBs
NCBI-ProteinID: ADR61528
Position
complement(4420846..4422114)
AA seq 422 aa
MLIAAPASGQGKTTVTAALARLHRNLGRKVRVFKCGPDFLDPMILERASGAPVYQLDLWM
IGAEESRRLLWEAAGEADLILIEGVMGLFDGTPSSADLARHFGVPVLAVIDGTAMAQTFG
ALALGLARYQADLPFAGVLANRVGSLRHAQLLEGSLTEGLRWYGGLSRERGIELPSRHLG
LVQASELNDLDTRLDAAAEALGASCDAALPPPVSFAEPEPQACVASLAGVRIGVARDEAF
AFIYGANLDLLRNLGAQLVFFSPLHDHELPAVDSLYLPGGYPELHHHALAANAPMCEAIR
AHHAQGKPLLAECGGMLYLLDALTDVAGERAELLGLLPGEATMQKRLAALALQAVELPEG
TLRGHTYHHSLTSTALEPIARGLSPNGGRGNEAVYRLGRLTASYVHFYFPSCPDAAAALL
RP
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgttgatcgcggcgccggcctctggccagggcaagactaccgtcactgctgcgctggcc
cgcctgcaccgcaacctcgggcgcaaggtgcgggtgttcaaatgcgggcccgactttctt
gacccgatgattctcgaacgggccagtggcgcgccggtgtatcagctggatctgtggatg
atcggtgccgaggaaagccgtcgtctgctgtgggaagctgctggcgaggctgacctgatc
ctcatcgaaggggtgatggggctgttcgacggcaccccgtcaagcgccgacctggcgcgc
cactttggcgtgccggtgctggcggtgatcgacggcacagccatggcccagaccttcggc
gccctggccctgggcctggcgcggtaccaggccgatctgccgttcgccggcgtgctggcc
aatcgggtaggcagcctgcgtcatgcgcaactgcttgaaggcagcctgaccgagggcttg
cgctggtatggcggcttgtcccgcgagcgcggcatcgaactgcccagccgccacctgggc
ctggtgcaagccagcgagctgaatgacctggacacccgcctggacgctgccgccgaagcg
ctgggcgccagttgcgatgcggcgttgccgccgccagtaagttttgccgagccggaaccg
caagcctgcgttgcctcgctggccggtgtgcgcattggcgtggcgcgggacgaggcgttc
gccttcatctatggcgctaacctcgacctgttgcgcaacctgggtgctcagctggtgttc
ttctcgccgctgcacgaccacgaactgccggcggtagacagcctgtatctgccgggtggt
tatcctgagctgcatcaccatgcgctggccgccaacgcaccgatgtgcgaggcgatccgc
gcccaccacgcgcagggcaagccattgctggccgagtgcggcggcatgctgtacctgctc
gatgccctgactgacgtggccggtgaacgtgccgaactgctcggcctgctgccgggtgag
gccaccatgcagaagcgcctggctgccctggcgctgcaggcggtggaactgccggagggg
accttgcgcggtcacacctatcaccattcgctgaccagcactgcgctggaaccgattgcc
cggggtctgagccccaacggcgggcgtggcaacgaggcggtttatcgtctgggccggctg
acggcctcttacgtgcacttctatttcccttcctgcccggatgcggcggcggcgctgttg
cgaccatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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