KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_4383
Entry
PPUBIRD1_4383     CDS       T01975                                 
Symbol
mrcB
Name
(GenBank) MrcB
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00550  Peptidoglycan biosynthesis
ppb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPUBIRD1_4383 (mrcB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ppb01003]
    PPUBIRD1_4383 (mrcB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppb01011]
    PPUBIRD1_4383 (mrcB)
Enzymes [BR:ppb01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     PPUBIRD1_4383 (mrcB)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     PPUBIRD1_4383 (mrcB)
Glycosyltransferases [BR:ppb01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   PPUBIRD1_4383 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:ppb01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   PPUBIRD1_4383 (mrcB)
SSDB
Motif
Pfam: Transgly UB2H Transpeptidase UvrB_inter
Other DBs
NCBI-ProteinID: ADR61956
Position
complement(4893244..4895490)
AA seq 748 aa
MKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFTGQKLSKNDFLTELD
ALGYRRESAANGPGAASVNGNTVDLNTRGFQFYEGMEPAQFVRVRFSGDYVAGLSGANGK
ALDVVRLEPLMIGGIYPKNLEDRILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIAR
AMWVNTSSGSMRQGGSTLTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAY
LNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERAL
ARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDE
DLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGRKGADDVEAAMVVTNPETGEVQALIG
SRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTLTSWVQDEPFSVKGADGQVWR
PQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLG
AGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQN
AMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKT
PFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQAWIDPYSGHGSDASCPGAVQMPYIRG
SEPPAGAACGGEQDPVESVMDWVKGWMN
NT seq 2247 nt   +upstreamnt  +downstreamnt
ttgaagctcagcctggttggcctggtgatcgttgccggcttcgcggtttacctcgatgcc
gtcgtccaggaaaagttctccggcaagcgctggaccatcccggccaaagtgtatgcccga
ccgctggagctgttcaccggccagaagttgagcaagaacgacttcctcaccgagctcgat
gcgctcggctaccgtcgcgaaagcgcggccaacggcccgggcgctgcgtccgtcaacggc
aataccgtcgacctcaatacccgtggcttccagttctacgagggtatggaaccggcgcag
ttcgtccgcgtgcgcttctctggcgattacgttgcgggcctttccggtgccaacggcaag
gcgcttgacgtggtgcggctggagccgctgatgatcggcggcatctatccgaaaaatctc
gaagaccgcatcctgatcaagatcgatcaggtacccaaatatctgctcgaaaccctggtg
gcaacggaggaccgcgagttctacagccacttcggcgtgtcgccaaagtccatcgcccgg
gccatgtgggtcaacacgtcgtccggctcgatgcgccagggtggcagtaccctgacccag
caattggtgaagaacttctacctcagcagcgagcgcagcctcagccgcaagctgaccgag
gcgatgatggcggtcctgctcgaactgcactacgacaaacgcgaaatccttgaggcctac
ctcaacgaggtgttcgtcggccaggacggtcaacgcgcggtgcacggctttggtctggct
agccagttcttcttcagccagccgctgtctgagctgaaactgcatcagatcgccctgctg
gtgggcatggtcaaaggcccgtcctactacaacccgcggcgtcaccccgagcgggccctg
gctcgccgcaacctggtgctcgacctggtggccgaacagggcgtggccagccaggcagaa
gttgatgcggcgaagaaaatgccgttgggcgtgacaaagcgtggcagcctggccgacagc
tcgttcccggctttcctcgacctggtcaagcgacagctgcggcaggactaccgcgatgaa
gacttgaccgaagagggcctgcgtatctttaccagcttcgacccgatcctgcagatgaag
gctgaaacctcgatgagcgagaccttcaagcgcctggcgggccgcaagggggcagacgat
gtggaagcggcgatggtcgtgaccaaccctgagaccggtgaagtacaggcgctgatcggt
agccgccaggcaggcttcgccggcttcaaccgggccatcgatgctgtgcggccgatcggc
tcgttggtcaagccgtcggtatacctgactgcgctggagcagccgagcaagtacaccctg
accagttgggtgcaggacgagccattttcggtcaagggggctgacggccaagtctggcgc
ccgcaaaactatgaccgccgcccgcatggcactatctacctgtatcaggggctggccaac
tcctacaacctgtcgaccgccaagcttggcctggaagtgggtgtgccgaacgtgatcaag
accattggtcgtttgggcgtgaatgtcgactggcctgcattccctgccatgttgctgggg
gcaggtggcatgtcgccgatgcaggtggcaaccatgtaccagaccatcgccaacggcggc
ttcaacacgccgatgcgcggcatccgcagcgtgctcaccgccgagggcgagccgctcaag
cgctacccgttccagatccagcagaccttcgacccaggtgccatttacctggtgcagaac
gccatgcaacgcgtaatgcgagaaggtacagggcgttcggtgtacaacaccttgccgcgc
tcgctgaccctggcgggcaagaccggtaccagtaacgactcgcgtgacagctggttctcc
ggcttcagtcaggatctgctggccgtggtgtggatggggcgtgacgataacggcaagaca
ccgtttaccggcgccaccggcgccttgcaggtgtggaccagcttcatgaagaaggccgac
ccgctgccgctggatatgccgcaaccggacaacgtggtgcaggcctggatcgacccctac
agtggccatgggtctgatgccagctgtccgggagcggtgcagatgccgtatattcgcggg
agtgagccgccggccggcgcagcctgtggcggcgagcaggacccagtagaatcggtaatg
gactgggtcaaaggctggatgaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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