KEGG   Paenibacillus peoriae: ABE82_22575
Entry
ABE82_22575       CDS       T04053                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
ppeo  Paenibacillus peoriae
Pathway
ppeo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ppeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ABE82_22575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppeo03021]
    ABE82_22575
   03400 DNA repair and recombination proteins [BR:ppeo03400]
    ABE82_22575
Enzymes [BR:ppeo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ABE82_22575
Transcription machinery [BR:ppeo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ABE82_22575
DNA repair and recombination proteins [BR:ppeo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ABE82_22575
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C
Other DBs
NCBI-ProteinID: ALA44094
UniProt: A0A0K2FDJ2
Position
complement(5235984..5239598)
AA seq 1204 aa
MLDVNNFEYMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNQPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSAEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGSFYLTMDNKEEEGSNMILRNMNEAISAYQRGTAGLHARVAIP
VKALNKTSFTEKQQEAMLITTVGKIIFNEIFPASFPYINDATRANLLYGTAEEFFVYEKG
VNLTEAIQNAPQANGVGKDYLGNIIARCFETYHTTETAVILDKIKQLGFTYSTRAGVTVA
VSDVIVPVEKQEILKGSEDKAQVVTNQYRRGLITNEERYDRIIDIWSKAKDDITEVLMKS
MDRYNSIMMMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRLEGRYCFETVRHPETGEILARRNELIDSDKAEAIVKAGVHKVQIRSVLSCRAKHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGTVKEVREGKDRREIDIQGEAETKTYSVTYGSRLRVSEGMTVEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
IDAGDTILLPGSFVDVHEYENANKIAILSGQEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVIIGKLIPAGTGMNRYRSVKFAQPEEGQSPSEELEP
ISAE
NT seq 3615 nt   +upstreamnt  +downstreamnt
ttgttggacgttaacaatttcgaatatatgaaaatcgggcttgcttcccccgaaaagatt
cgttcttggtcccgcggagaagtcaaaaaaccggagacgattaactatcgtacgcttaaa
ccggaaaaagaaggactattttgcgagaaaattttcggacctacgaaagactgggaatgt
cattgcggtaagtacaaacgtgtacgctataaaggtgttgtctgtgaccgttgtggagta
gaagttactcgcgctaaggttcgacgtgagcgtatgggccatattgagttggctgctcct
gtatcgcacatttggtactttaaaggcattccaagtcgtatgggtcttgctcttgatatg
tctccaagatctctggaagagatcatttacttcgcatcttatgttgtaaccgatccagga
gatacgcctttggagaaaaagcaactcctgtccgagaaagaataccgtagctatcgtgag
aaatatggctatggattccaggcaggtatgggtgctgaagcggttaaaaagcttcttcaa
gatttggatatagacaaagagttggaattcttgaaagaagagctgcgtacagctcaagga
caacgtcgtaaccgtgcaatcaaacgccttgaagttattgaggcattccgtaactccggc
aaccaaccggattggatgatcatggacgtacttcctgttattcctcctgagcttcgtcca
atggtacagttggatggtggtcgtttcgctacttctgaccttaacgacttgtatcgtcgt
gttattaaccgtaataaccgtctgaaacgtctgttagatctaggtgcgccagatattatc
gtacaaaatgaaaaacggatgttgcaggaagctgttgacgccttgattgataatggtcgt
cgtggtcgtcctgttacaggtccaggtaaccgtcctttgaaatccctcagccacatgctg
aaaggtaaacaaggacgtttccgtcagaacttgctcggaaaacgtgttgactactctggt
cgttccgttatcgttgtaggtccgtacttgaaaatgtatcaatgcggtttgccgaaagaa
atggcacttgaactgttcaaaccttttgttatgaaagaactagtgaacaaaggtttggcg
cacaatatcaagagcgcgaagcgtaaagtagaacgtgtgagtgcagaagtatgggatgtg
ctggaagaagtaatcaaggagcatccagttcttctgaaccgtgcccctacgttgcataga
ctcggtatccaggcgttcgaaccgattttggttgagggtcgtgcgattcgtctgcatccg
ctcgtatgtactgcatataatgccgactttgacggtgaccaaatggctgttcacgttccg
ttgtctgcggaagctcaagctgaagctcgtttgcttatgctagcatccggcaacattttg
aatccgaaagacggcaagccagttgttacaccttcccaggatatggttcttggttctttc
tatctgactatggataacaaagaagaagaaggaagcaatatgatccttcgcaacatgaat
gaagctatatcggcttaccaacgcggtacagctggtcttcatgctcgtgtagctattccg
gttaaagctttgaataaaacgagctttacagaaaaacaacaggaagcgatgttgatcaca
acggttggtaaaattatttttaatgaaattttcccggcaagcttcccgtacatcaatgat
gcgacccgtgcgaacctgctttatggtactgcggaggagttctttgtttacgagaagggt
gtaaatcttacagaagccattcaaaacgctccgcaagctaacggagtaggcaaggattac
cttggtaatatcattgcccgttgttttgagacttaccatacaacagaaacagctgtaatt
ctggataaaatcaagcagcttggctttacgtattccactcgtgcaggggtaaccgttgct
gtatcggacgtaatcgtgccggtggaaaaacaagagattcttaagggatctgaggacaaa
gcgcaagttgtgacgaatcagtatcgtcgtggtctgattacgaatgaagaacgctatgac
cggattatcgacatttggtctaaagcgaaagatgatattaccgaagtattgatgaagtcc
atggatcgctacaactctatcatgatgatggtggactccaaagcgcggggtaacaagtca
cagattactcagctcggcggtatgcgtggtctgatggccaatccatccggacgtattatc
gaactcccaatcaaatcaaatttccgtgaaggtctgacagtactcgagtacttcatctcc
actcacggagcgcgtaaaggtttggcggatacagccctccgtacggctgactccggttac
ctgactcgtcgtctcgtagatgtggcacaggatgttatcgtgcgcgaagaagactgcgga
acggataaaggcttcacagtaagtcgtatccaggacggtaaagaagtgattgaggatctc
tatgaccgtctggaaggtcgctattgctttgaaacggtacgtcatcctgagactggcgag
attttggctagacgtaatgaactgattgactccgacaaagctgaagcgattgttaaagcc
ggtgtacacaaagttcagattcgttctgtactaagttgccgtgctaaacatggcgtctgc
aagaaatgctacggtcgcaatctggctactggtaaacacgttgagattggtgaagcagtt
ggtattatcgctgcacaatccattggtgagccaggaacacagcttactatgcgtacgttc
cacacaggcggcgtagcgggtgacgatattacacaaggtttgcctcgtatccaggagctt
tttgaagcacgtaatcctaaaggtcaggcaactattagtgaaattgacggtacagttaaa
gaagttcgtgaaggtaaagaccgtcgtgagatcgacattcagggtgaagctgaaacgaaa
acatattcagtaacgtatggttcccgcctgcgcgtaagcgaaggtatgactgttgaagct
ggggacgaactgacggatggttcgattgatcctaaagaaatgttgcgtattaaaggtatt
cgcggggtgcagaactatatccttcaggaagttcaacgcgtataccggaaccagggcgta
gaaatcaacgacaagcacgtagaagttatgattcgtcaaatgttgcgtaaaatccgtatc
attgatgcgggcgacacgatcttacttccaggctcctttgttgatgtccatgagtatgaa
aatgcaaacaagatagcgattctcagcggccaagaaccagcggtagccaagccggtactg
ctcggtattaccaaggcctctctggaaactgactccttcttgtcagcagcatccttccag
gaaactactcgtgtcttgactgatgcagctattaaaggcaaggtcgatcagttgcttggg
ctgaaagagaacgtaattattggtaaattgattcctgcgggaacaggtatgaaccgttac
cgtagcgtgaaatttgcccaaccagaagaggggcagtctccatctgaggagctcgaacca
atttcggccgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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