KEGG   Prunus persica (peach): 18771628
Entry
18771628          CDS       T03092                                 
Name
(RefSeq) TATA-box-binding protein 1 isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pper  Prunus persica (peach)
Pathway
pper03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18771628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pper03000]
    18771628
   03021 Transcription machinery [BR:pper03021]
    18771628
Transcription factors [BR:pper03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    18771628
Transcription machinery [BR:pper03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     18771628
  RNA polymerase III system
    TFIIIB
     18771628
  RNA polymerase I system
    SL1/TIF-1B
     18771628
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 18771628
NCBI-ProteinID: XP_007202599
UniProt: M5W3G5
Position
G7:complement(332799..338155)
AA seq 201 aa
MEEQGGFEENQPVDLSIHPSGIVPTLQNIVSTVYLGCRLDLKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFSASFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRE
DTYKAFENIYPVLTEFRKVQQ
NT seq 606 nt   +upstreamnt  +downstreamnt
atggaggaacaaggtggattcgaagagaaccaacctgtggatctttccattcacccctct
ggtattgttcccactcttcagaatatcgtatctacggtttacttgggttgccggctggat
ctcaagcaaattgcgttgcaagctcggaacgccgaatacaaccccaagcgttttgctgct
gttattatgagaataagagaaccaaaaactacagcgttgatatttgcctctggaaagatg
gtatgcacaggtgcgaaaagtgaacagcaatcaaaactggcagcaaggaagtatgcccga
atcatccaaaagcttggatttagtgcttcgtttaaggatttcaagattcaaaatattgtt
ggctcctgtgatgttaaattccctataagacttgagggtcttgcatactctcatggtgcc
ttttcaagttatgagccggaactttttccagggctgatatatcgcatgaagcagccgaag
attgttcttcttatatttgtgtcggggaaaattgttattacgggtgcaaaggtaagagaa
gacacgtataaggcctttgagaacatataccccgtccttacagagttcaggaaggtccag
caatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system