KEGG T03092: 18772328

Prunus persica (peach): 18772328

Entry

18772328          CDS       T03092

Name

(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1

K03129

transcription initiation factor TFIID subunit 4

Organism

pper Prunus persica (peach)

Pathway

pper03022

Basal transcription factors

Brite

KEGG Orthology (KO) [BR:pper00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18772328
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pper03021]
    18772328
   03036 Chromosome and associated proteins [BR:pper03036]
    18772328
Transcription machinery [BR:pper03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     18772328
   Coactivators
    SAGA/TFTC/STAGA complex
     18772328
Chromosome and associated proteins [BR:pper03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     18772328

SSDB

Motif

Pfam:

TAF4 RST DUF4513

Other DBs

NCBI-GeneID:

18772328

NCBI-ProteinID:

XP_020421676

Position

G6:11236781..11246492

AA seq 931 aa
MDPSVVKKLLEDDEDETMHSGADLLAFQAALNKDIEGDVSASQPSDSDTAVLCQGSNNTS
SQSLLQLSIASQDENTAGQIQQDQKIAQHRELHLYEMEPKQQGSIAENMQQKNDASKVLN
HFPLPQKQPHGDLQEGQAEQKPLQIPETTGMLISEKHPSSTEEHGIAPNLKSESQYLKLQ
KMSSQQSMITEQPRNPSNQSRQVVFYQLYPLLLPQLNKDRGRQLTTLFGRLKSRQILKDA
FVRELKSIVGDEMLRMAVKEAPLMPSPNHRLLPKASVPQQPPRMLSISAGAAQLTNPRSS
ALHLRGPNSATDPSHSLPSTVQVQTDSSHPLIKNSARKLPEAECHSDSEGMQVSQISSSS
VVATNQERECFSVPMHGNAGGTCHLFSGTSVNTCALPVKPQPSDAQLRQVLQHQSIGSTQ
SGGEARGANIMSVSKTERQNSMNEPSRLQGGSLTHFTTNATLQQNPNPSQSSNKEQSSRP
VSSMAYVKQELIDQTAEQQHKPPLPSSHGLPSVSAGVLEQGNASSVISMDESLEKQPSRM
GVSSSPSSSTITVPQSSVSPSFMMQVNPSVSLGPRISSGTSPCGINNKTPPKKPSIGRKK
PLEALGSSPPQSSKKQKVSGAFSDIEQLNDVTAVSGVNLREEEEQLFPGPKEDSRASEAS
RKSVQKEEERLILEKAPLQKKLAEIMVKCGLKSVTHDVERCLSLCVEERMRGLINNLIRL
SKQRVDAEKSRHHTITNSDVRQQIMDLNQKAREEWEKKQAGAEKIRRLNEPEVDNGVDGD
EEKDESHPKSFKTNIEADGKLRTTAANVAARAAVGGDDMFSKWQLMAQARQKHEGEIDAA
SGSQPGKDVNHKPTSTTGRIMKGSQEAEKRGGPAPVARAGPIRKSGRNQVIMPQTRMART
ISVKDMIAALEREPQMSKSMLIYRLHERIQS

NT seq 2796 nt +upstreamnt +downstreamnt
atggatccatccgttgtgaagaagctccttgaagacgatgaggatgaaaccatgcattcc
ggggcggatttgttagccttccaggctgccctgaataaggacatagaaggagatgtgtct
gcttcccagccgtctgattcagacacagcggttttgtgtcaaggaagcaataatacttct
agtcagtcattactgcagttgagtattgctagccaggatgaaaatacagctggtcaaatt
caacaagaccaaaaaattgcacaacatcgagaactgcatttgtatgaaatggaaccaaag
caacagggatccattgctgagaatatgcaacagaaaaatgatgcctcaaaggtactcaat
cactttcctttaccccagaagcaaccacatggtgatcttcaagaaggacaggcagaacag
aagccactccagattcctgaaacaactggaatgctgatttctgaaaaacacccaagctca
acagaggagcacggcatagcacctaatctcaaaagcgaatctcagtacttaaagcttcag
aagatgagcagtcaacaatcaatgatcacagagcaaccaagaaacccttcgaatcaaagc
agacaagtagtattttaccagttatatcccctcttattgccccaactaaataaagacaga
ggaaggcaacttactactctatttggtagactcaagagccgtcaaatcctcaaagatgct
tttgtccgggaacttaaaagtattgttggggatgagatgctcagaatggcagtaaaggaa
gcgcccctaatgcctagtcctaaccatcggttactgcctaaggcctcggtcccgcaacaa
cctccaaggatgctatctattagtgcaggtgctgcacagttgactaaccctcgttcatct
gcacttcatctgagaggtcccaattctgccactgacccatcacacagtctcccttcaaca
gttcaggtacagactgattcaagccatccgctcattaaaaatagtgctagaaaattgcca
gaagcagaatgtcactcagattctgagggaatgcaagtaagtcaaatttcttcctctagt
gtggtagctaccaatcaagaaagggagtgcttctcagttcctatgcatggaaacgctggt
ggtacttgtcacctattttcagggacaagtgtcaatacttgcgcattgcctgtcaaaccg
cagccttctgatgcacaactgagacaagtcctacaacatcaaagcataggttctactcag
tcaggtggggaagcacgtggagcgaacatcatgagtgtgtccaaaacggagaggcaaaat
tctatgaatgaacctagtagactgcaaggtggatctcttactcactttacaactaatgca
actttgcaacagaatcctaatccttcacaatcctcaaataaagagcagagttcccgtcct
gtgtcatcaatggcttatgtcaaacaggaattgattgatcagactgctgagcagcagcac
aagcctccattgcctagttcacatggattgccttcggtttctgctggagtacttgaacag
ggaaatgcatcatctgtaatttcaatggatgagtccttagagaagcagccttctagaatg
ggtgtttcatcatcgccttcgtcgtctacaatcacagtgcctcaaagttcggtgtctcct
tccttcatgatgcaagtcaatcctagtgtctcgttaggccctcggataagctctggaacc
tctccttgtgggattaataataaaacacctccaaaaaagccttctattggccgaaagaag
ccgcttgaagcacttggttcttcaccaccgcaatcaagtaagaagcaaaaagtaagtggg
gcgttttcggatattgaacaactcaatgatgtcactgccgtcagtggagttaatcttagg
gaagaggaagagcagctgtttccggggcccaaggaggatagtcgagcttcagaagcctct
cgaaaatctgtgcaaaaagaagaggaaaggctgattttggagaaggctccactgcagaaa
aaattagctgaaattatggtcaaatgtggtctgaaaagtgtaacccatgacgtggagcga
tgcttgtcactgtgtgtggaggaaagaatgaggggactaataaataatttgatccgactg
tcaaagcagcgggttgatgctgagaaatcaagacaccacactattactaactctgatgtt
cggcaacaaattatggatctcaatcagaaagctagggaagaatgggagaaaaagcaggct
ggggcagaaaagatccggaggcttaatgagcctgaggttgacaatggagtcgatggagac
gaggagaaggatgaaagccatcctaaatcatttaagacaaacatagaggcagatggcaaa
ctgaggacaacagcagcaaatgttgctgcccgtgctgcagttgggggagacgacatgttc
tcaaaatggcaactcatggcacaagcccggcaaaaacatgaaggtgagattgatgcggcg
tctgggtcccagccaggtaaagatgtaaaccacaaacctacatcaacaactggaaggatc
atgaagggcagtcaagaagcagagaaaaggggtggtccggctcctgtcgctagagctggg
ccaattagaaaatctggaaggaaccaagttatcatgcctcaaacaaggatggctcgtact
atatctgtcaaggatatgattgctgccttggaaagggaacctcagatgtcgaagtctatg
ttgatatatcggttgcatgagagaatccaatcctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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