KEGG   Pseudomonas putida F1: Pput_0563
Entry
Pput_0563         CDS       T00537                                 
Name
(GenBank) Exodeoxyribonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
ppf  Pseudomonas putida F1
Pathway
ppf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Pput_0563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppf03400]
    Pput_0563
Enzymes [BR:ppf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Pput_0563
DNA repair and recombination proteins [BR:ppf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Pput_0563
SSDB
Motif
Pfam: Exonuc_VII_S Phage_TAC_11 Vps53_N
Other DBs
NCBI-ProteinID: ABQ76731
UniProt: A5VXX1
Position
complement(629129..629371)
AA seq 80 aa
MARKKASLDFEQSLADLQALVERLENGELSLEESLAAFEQGIALTRDCQGALAQAEQKVQ
ILLERDGELAAQPFDAEPEA
NT seq 243 nt   +upstreamnt  +downstreamnt
atggcccgcaaaaaagcctccctcgatttcgagcaatccctcgcagacctgcaagcactg
gtcgagcgcctggagaacggcgagttgtcgctggaagagtcgctggccgcctttgaacaa
ggcatcgccctgacccgtgactgccagggcgccctggcccaggccgaacagaaggtgcaa
attctgctggagcgcgacggtgaactggctgcccagcccttcgacgcggagccggaagca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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