KEGG   Pseudomonas putida F1: Pput_1336
Entry
Pput_1336         CDS       T00537                                 
Name
(GenBank) putative RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppf  Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppf03021]
    Pput_1336
Transcription machinery [BR:ppf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Pput_1336
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_2 TPR_11 Sigma70_r4 TPR_14 TPR_12 TPR_1 ANAPC5 TPR_9 TPR_7
Other DBs
NCBI-ProteinID: ABQ77496
UniProt: A5W036
Position
1499687..1500925
AA seq 412 aa
MAALAQVRAEVEAVYRRESRRILATLIRLLGDFDLAEEAMHDAFFIAVERWQRDGIPANP
RAWLVSVGRFKAIDALRRRVRFDRSQADLSMLLDGQAQDPSEEELLADDRLRLIFTCCHP
ALSADAQVPLTLREVCDLTTEQIARAFLQSPATIAQRIVRAKAKIRDAGIPYQVPELNEL
PERLESVLRVIYLVFNEGYSASSGETLLQQELSDEAIRLARLLVQLLPDPEAVGLLALML
LQASRQRARIDGQGDLVVLEQQDRSLWDRQFIAEGCALVRQALQSRAFGAYTIQAAIAAV
HAEAATAEETDWGEIVGLYDVLQRYWPSAVVALNRAVALAKRDGPEVGLREVEGILARGE
LLDYHLAHAARAELHCQLGQVEEARAAWQQALALTRQAPERRHIERRLQAIE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggccgcactggcccaggtgcgcgccgaagtcgaggccgtgtaccggcgggaatcgcgg
cgcatactggcgacactgatccgcttgctgggtgatttcgacctggccgaggaggccatg
catgacgccttcttcattgccgtcgagcgctggcaacgcgacggtatccccgccaacccg
cgagcgtggctggtctctgtcgggcgcttcaaggccatcgacgcgctgcgccggcgcgtc
cgcttcgaccgctcccaggcggacttgagcatgctgctggatggtcaggcgcaggacccc
agtgaagaagaactgctggcggatgaccgcctgcggctgatcttcacttgttgccatccg
gccctgtcggccgacgctcaggtgccattgacgcttcgcgaagtctgcgacctgaccacc
gagcagatcgcccgcgcctttctgcaaagcccggccaccatcgcccagcgtatcgtgcgc
gccaaggccaagatccgtgacgcgggcataccgtatcaggtaccggagctgaatgagctg
cccgagcgcctggaaagcgtattgcgggtgatctacctggtgttcaatgagggctattcg
gcgtcatcgggcgaaacactgctgcagcaggaactgagcgatgaagccattcgcctggcg
cggttgctggtgcagttgctgcccgacccggaggcggtcggcctgctggcgttgatgttg
ctgcaggcgtcccggcagcgggcgcgcatcgatggccaaggcgatttggtggttctggag
cagcaggaccgtagcctgtgggaccggcagttcattgccgaaggctgtgctctggtgcgc
caggccctgcagagccgtgcatttggggcctataccatccaggcggcgattgctgccgtg
catgccgaagcggcgacggctgaagagacggactggggagaaatcgtcggcctgtatgac
gtgttgcagcggtattggccatcagcggtggtggcgcttaaccgcgcggtggccctggcg
aagcgggatgggccggaggttggcttgcgggaagtcgaagggatcctggcgcggggggag
ttgctggactatcacctggcacatgcggcgcgcgccgagttgcattgccaactggggcag
gtagaagaggcgcgagcggcctggcagcaggcgctggccttgacccgacaggcgcctgag
cggcggcatatcgagcggcgtttgcaggctatcgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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