KEGG   Pseudomonas putida F1: Pput_2130
Entry
Pput_2130         CDS       T00537                                 
Name
(GenBank) ImcF domain protein
  KO
K11891  type VI secretion system protein ImpL
Organism
ppf  Pseudomonas putida F1
Pathway
ppf02025  Biofilm formation - Pseudomonas aeruginosa
ppf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pput_2130
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Pput_2130
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppf02044]
    Pput_2130
Secretion system [BR:ppf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pput_2130
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: ABQ78269
UniProt: A5W2A9
Position
2410709..2414329
AA seq 1206 aa
MNQIWTQLKRWGWPWVTRIGLALPLLLGLGALLMLVAIWWLGPQWTWREQQPLASVAHRS
VASLVLVLVPLLCWLGVLRTRFRRLQAERRQALAAEQDVALPFVQAQERALSQGLERYLD
NAGGRRALYRLPWYLVLGDEQAGKSSFIDRTDQRFTLTRIDQAQARGRQAEALAYPVGWW
VSDDAVIIDPPGVFISQKPPVGSAANDPTNASSPPGIQARLWEHLLGWLQRKRSQRALNG
VLLVVDLPALLHGKPEQRVALAHGLRTRLYEVSSQLGARLPLYVVLTKFDLLDGFDQFYS
QLPAAKRESLLGFTFKLDAVDAFDAWLDEYDEHYRRLLTQLHEQVIDRLDVLGKTAPCVR
LFSLHAQLIGLRPILQAFLRETLASDRFTTPPLVRGVYWSSVVQQGDMRNAFVREAAQPY
TTKLPLREGKAQGKALVYFIQQAFRRVIYQEAGLAGDNVRVARSKRHLLWVGSGVGILAF
SIAIASWQRYAEINGAKAASVLAKSQEYSGHEVDMRLDPTGRNLLAPLDQIRDAVAVFGD
YRAAWPVVADFGLYQGRNIGPLVDEAYLSLLSKRFLPALASGVIDAMNAAPPGSEQQMAA
LRVYRMIEDRNSRRPEWVEGWMARQWQRAFPGQGQLQRDLMQHLKYALAYADTDLPQYRQ
RVSEVQQVLRKLPLPQRVYAGLKQQSYEQVHAGLDLRHQVGPAFDVVYQPSSGSRQGGED
VRLAGMLTAKGFRDYFEPHSQRFAEMAMVDQWALGERSQLDYSDVDRDALTERLYNLYSA
DYIDSWRRALNAFTVADFRDMDHGVAILEQLTGPAAPLQRLLDTVRDNTSLASPAVVESP
GELSTLRVATGKPEQPQALAIQRAFAGLGAMLQATGEKPSYYDETLGAVAAVLDYAKAVQ
DSPDRGKAALQAVHQRFAMTGQDPIGTLQRVATGLPEPISHQVRKLADQTAQVLNVEALR
ELERRWDADVYSFFQQRLAGRYPFVVKAPDASLDDFEAFFGPKGRLQQFNDRYLKVFLKD
NLEALQSAQHGQSLIRADVIEQLELAERIRETFFDQRGQLSVQFSIEPLGLSANQRTSLL
DLDGQLIAYTHGPSHITGIVWPNTLGQQVRSNLTLLRQNGNSSSLEYRGPWSMFRLLSRG
ALNGRTATSVDLSFRTGDGVMRYRLNAEKAFNPITQQPFKGFRLPRGLLQQPANGVQAAL
SDEQRL
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgaatcaaatatggacgcaactcaaacgttggggctggccgtgggtaacgcgcattggc
ctggcgctgccgctgctgctcgggcttggcgctttgctgatgctggtcgctatctggtgg
cttggcccgcaatggacgtggcgggagcagcagccgctggcaagtgtggctcatcgcagc
gtggcaagcctggtgctcgtgctggtgccgcttctgtgctggcttggggtgctgcgcacg
cgctttcgccgcctgcaagcggagcgccggcaggcactggccgccgaacaggatgtcgcg
ctaccgttcgtgcaggcgcaagagcgggccttgagccaggggcttgagcggtatctcgac
aatgccggtgggcgacgcgcgttgtaccggctgccttggtacctggtgttgggcgacgaa
caggccggtaaaagcagcttcatcgaccgcaccgatcagcgctttaccctgacgcgtatc
gaccaggcccaggcacggggccgacaggctgaagcactggcctatccggtaggctggtgg
gtcagcgacgatgccgtgatcatcgacccgcccggcgttttcatcagtcaaaaaccaccg
gtgggctcggcggccaacgaccccaccaatgcctcctcgccgcccggtatccaggcccgg
ttatgggagcacctgttgggctggctgcagcgtaagcgaagccagcgggcgctcaatggt
gtgttgctggtggtcgacctgccggcgctgctgcatggcaagcccgagcagcgcgtcgcg
ctggcccatgggttgcgcacacgcctgtacgaagtgagcagtcagttgggcgcgcgcctg
ccgctgtacgtggtcctgaccaaattcgatctgctggacggcttcgaccagttctacagc
cagcttccggccgccaagcgtgaaagcctgttggggttcaccttcaagctggatgcggtt
gacgcgttcgacgcctggctggatgagtatgacgagcactacaggcggcttctcactcaa
ttgcatgagcaggtcatcgatcggctggatgtactgggcaagacagcaccgtgcgtgcgc
ctgttctcactgcatgcacagctgatcgggttgcgccccatactgcaggcattcttgcgc
gaaaccctggcgagtgaccggttcaccacgccacccttggtgcgtggtgtgtactggtcg
tcagtggtacagcaaggcgacatgcgcaatgcctttgtccgtgaagcggctcagccctac
acgacgaagctacccctgcgtgaaggtaaggcacaggggaaggcgttggtctatttcatc
cagcaagcattcaggcgggttatttatcaggaagccgggctggcgggcgacaatgttcgg
gttgcgcgcagcaagcgccacttgctgtgggtgggctctggtgtaggcatcctggcgttc
agtatcgccattgccagctggcagcgttacgccgagatcaatggcgccaaggctgccagt
gtgctcgccaaaagccaggagtacagtggtcacgaagtcgatatgcgtcttgatccgacc
gggcgcaacctgctggcgccactggaccagattcgcgatgcggtggcggtgtttggcgac
tatcgtgcggcctggccggtggttgccgattttggcttgtatcaagggcgcaacattggt
cccttggttgatgaggcgtacctcagcttgttgtcgaaacgtttcttgccggccttggcc
agtggtgtgatcgatgccatgaacgctgcaccacctggcagtgagcaacaaatggccgcg
ctcagggtttaccggatgatcgaggaccgcaacagccgccggccagaatgggtcgagggc
tggatggcccgtcagtggcaacgggcctttcctggccagggtcagttgcagcgtgacctc
atgcagcacctgaagtacgccttggcctatgccgataccgatttgccgcaataccgccag
cgggtcagcgaagtgcagcaggtgttgcgcaaattgccgttgccacagcgggtctacgca
gggctgaaacaacaatcgtacgagcaggtgcacgccgggctggacctgcgccaccaggta
gggcctgcgttcgatgtggtgtaccagccgtcttccgggtcaaggcaagggggggaggat
gtaaggctggccggcatgctcaccgccaaaggcttcagggattacttcgagccgcacagc
caacgcttcgctgaaatggcgatggttgatcaatgggcattgggggagcgcagtcaactc
gactattcggacgtcgaccgcgatgcgttgaccgagcggctgtataacctctacagcgcc
gattacattgacagctggcggcgcgccctgaacgcgtttacggtggctgacttccgtgat
atggaccatggtgtcgcgatcctggagcagttgaccggccccgcagcaccgttgcaacgg
ctgctggatacggtcagggataacacctcgcttgcgtctccagcagttgttgaatcaccg
ggtgagctgagtacgctgcgggtagcaaccggaaaacccgagcaaccgcaagcgttggcc
atccagcgggcgtttgcaggcctgggcgccatgctgcaggcgacaggagaaaagccgagc
tactacgatgaaacccttggcgctgttgcggccgtgctggactacgccaaggccgtacag
gacagcccggaccgcggcaaggccgcgttgcaagccgtgcatcagcgctttgcgatgaca
gggcaggacccgatcggtaccctgcaacgtgttgccacaggtttaccggagcctatcagc
caccaggtcagaaagctcgccgaccagactgcccaggtgctgaacgttgaagcactgcgc
gaactggagcgacgttgggatgctgacgtgtacagttttttccagcaacgcctggcaggc
cgctacccctttgtggtgaaggcacccgatgcttctttggatgacttcgaggcgttcttc
gggccgaaagggcgcctgcagcagtttaatgatcggtatctcaaggttttcctgaaggac
aaccttgaggctttgcagtccgctcagcacgggcaatccctgattcgtgccgacgtgatc
gagcagctcgagctggcggagcgcatccgcgaaaccttcttcgatcagcgtggccagctg
agtgtgcagttcagcatcgagcccttggggctcagtgcgaaccagcgtaccagcctgctg
gacctggatggccagttgattgcctacacccatggcccaagccatatcacgggtattgtc
tggcccaataccctggggcagcaggtccgtagcaatctcaccttgctaaggcaaaatggc
aacagcagcagcctggagtaccgtggcccgtggtcgatgttccgcttgctcagccgcggc
gcgctcaatggccggacggcgaccagcgtggacctgagcttccggaccggagatggcgtg
atgcgctatcggcttaacgctgaaaaagccttcaatcccattacccagcaaccgttcaaa
ggcttccgcttgccccgaggcttattgcaacagccagccaatggggtgcaggcggcgcta
tcggatgagcagcgactatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system