KEGG   Pseudomonas putida F1: Pput_4158
Entry
Pput_4158         CDS       T00537                                 
Name
(GenBank) tRNA pseudouridine synthase D, TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
ppf  Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppf03016]
    Pput_4158
Enzymes [BR:ppf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Pput_4158
Transfer RNA biogenesis [BR:ppf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Pput_4158
 Prokaryotic type
    Pput_4158
SSDB
Motif
Pfam: TruD CinA_KH
Other DBs
NCBI-ProteinID: ABQ80282
UniProt: A5W822
Position
complement(4654645..4655703)
AA seq 352 aa
MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLEQLRQQGVPNYFGTQRFGHGGGNVHDALDW
AARKALPEQRNVRSRLLSAGRSYLFNQLLAARVADGSWARAQVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPMWGEGASPAGAAPAQLENAIGARQPALCQWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaccgaactggaattgctgggcccgcgcgcatcgggcgaacccctgggcaccgccgtc
ctcaaagcggttgccgaagactttcaggttgacgaagtcctggatataccgctatcgggc
caaggcgagcacctgtggctgtgggtcgagaagcgtgatctgaacactgaagaagccgcc
cggcgccttgcccgcgctgctggcgtgcccgtgcgcagcatcagctatgccggcctgaag
gaccgccaggcgctcacccgccagtggttcagcctgcacctgccgggcaaggccgatccg
gatctgtcgcgtgccgaggatgccagcctgcgtgtgctcaaacaggtgcgtcaccagcgc
aaactgcagcgcggcgcgcattcggccaacgggttcaccttgcgcctgaccgccctggct
gccgatcaccaggcggtggatgcgcgcctggagcagctcaggcagcaaggtgtgcccaac
tacttcggcacccagcgctttgggcacggtggtggcaacgtccacgacgccctcgattgg
gccgcgcgcaaggctttgcctgaacagcgcaacgtgcgttcgcggctgctttcggccggg
cgcagctacctgttcaatcagttgctggctgcgcgtgtcgctgacggtagctgggcccga
gcccaggtcggggacctgctggcgttcaccgacagccgcagtttcttcccggcgggtgag
gcggaatgtgccgacccgcggctggcgattctcgacttgcatccaaccggcccgatgtgg
ggggagggcgcttcacctgctggcgctgcgcctgcccagctggaaaacgctatcggcgca
cgtcagccggcactttgccagtggctggcccaggcgggcatggatcacgaacggcgaatt
ctgcggctccctattggcggcctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtggtggtgcgtgaagtcgtggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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