KEGG   Pseudomonas putida F1: Pput_4172
Entry
Pput_4172         CDS       T00537                                 
Name
(GenBank) RNase HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
ppf  Pseudomonas putida F1
Pathway
ppf03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pput_4172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppf03032]
    Pput_4172
Enzymes [BR:ppf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     Pput_4172
DNA replication proteins [BR:ppf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     Pput_4172
   Elongation factors (archaeal)
     Pput_4172
SSDB
Motif
Pfam: RNase_HII E1_dh
Other DBs
NCBI-ProteinID: ABQ80296
UniProt: A5W836
Position
complement(4670947..4671570)
AA seq 207 aa
MQIGLDFNLVEDLVAGVDEVGRGPLCGAVVTAAVILDPARPILGLNDSKKLTEARREALF
DEICEKALSFCIARAEVEEIDSLNILQATMLAMQRAVEGLHITPKLALIDGNRCPKLAVP
AAPVVKGDSQVPAIAAASILAKVTRDREMSAFELIYPGYGIGGHKGYPTPVHLEALARLG
PTPIHRRSFAPVRAAWEVREGVTDSLI
NT seq 624 nt   +upstreamnt  +downstreamnt
atgcaaattggactggacttcaacctggtagaagacctggtcgccggcgttgacgaagtg
ggtcgtggcccgctgtgtggcgcggtggtaacggcggccgtgattcttgatcccgcgcgg
ccgattctcggtctgaacgattcgaagaaactcaccgaagccaggcgtgaggcgctgttc
gacgagatctgcgaaaaggccttgagcttctgcatcgcccgtgccgaagtcgaggaaatt
gacagcctgaacatcctgcaggccaccatgctggccatgcagcgggcagtggagggcttg
cacattacgccgaagctggccctgatcgatggcaatcgctgcccgaagctggcggtgcca
gcagcaccggtggtcaagggggatagccaggtgccggccattgcggcggcatcgatcctg
gccaaggtgacccgtgatcgggaaatgagtgcgttcgaactgatctacccgggttatggc
attggcgggcacaagggctacccgaccccggtgcatctcgaggccttggcgcgccttggg
cctacgcccattcatcggcgttccttcgccccggtgcgggcggcttgggaagtgcgcgaa
ggcgtcaccgattccctgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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