KEGG   Pseudomonas putida GB-1: PputGB1_2773Help
Entry
PputGB1_2773      CDS       T00650                                 

Definition
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
ppg  Pseudomonas putida GB-1
Pathway
ppg02025  Biofilm formation - Pseudomonas aeruginosa
ppg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PputGB1_2773
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PputGB1_2773
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppg02044]
    PputGB1_2773
Secretion system [BR:ppg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PputGB1_2773
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: ImcF-related_N IcmF-related IcmF_C MMR_HSR1 AAA_16 CHAD
Motif
Other DBs
NCBI-ProteinID: ABY98667
UniProt: B0KU04
Position
3111368..3115165
Genome map
AA seq 1265 aa AA seqDB search
MKTLLRLLKSFWVLLPLLWLASLLIGWLVAPLVPWLRHHVPEALAIISACFLLVIVLRQY
QRIRAEHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAIAMLRTDRSAGGGGKAALSD
LPWYLVVGMSAAGKTSLLTHSGLSASIATANDSESGTQHCDWYFSPDAVMIDTAGRYLRD
DQSASEFSAFLRMLRKQRGKAAINGLVLVVSLPELLAANSDERNALAAQLVARVEEYAEC
LDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLGMTFGLSEIRNSGLHAVLQTRLKN
LQGHVRQHVDAQMIALGAEADSALLNFPQYFAALSDVLEQFLDHFTRGHRGGTPLLLRGL
YFTSALQTGQQLGQVYEDVIADEFALQAAYDEPAERAGKPVGNRSYFITDTFRQVIFPDR
DLTLYQSRLGRQATFSPLLLGLAVATGVLFIGWQALSFINNRQWLDGLRGQLAQIEHAQD
REQLLAAGKGLEVLRGQMAVVEAHRLQGVPLLLAAGLYHGEAVHQVSSAAYLAQLRSQAL
EPITRSLQVQMRAFNTFANGINQELEFTPAPLPKKRNGKPLAPALAAKATAANTRLGGYA
AKVNLATASDAAELSATTGGLSLSEEMLGRLDEQQVASIIDAYNTLKMYLLLTEPQIHPD
PAFVAASLPQAWTGAAAEGAPADAGVIEENAPLYVQLLEQGQAPALPRNEQLIDETRQNL
KAFMISSSLVDREYLRLQLESSRQFPTLSLNDLVPQPGRALLYGSAGVPAIYTRQGWDTF
VKPELIKLVSGNLRNESDWVLDGEGGDALVQKANFVREFMTRYKRDYTQAWYKMVSSVGV
RHFTDLASATEQLGLLSDVQNSPVKNLLAAVNDNTQWDLPTKHAIPAPGAARDDGFWSKV
TGLFDTENALPTSVAPALPAVDDGSLAKRFEPVARVFAQNNAEGADSTIMDRYLAALRKL
KVRMNNIQRSQDVGKSSKQLISETLEGQPSEVTTVRNYVESSVDTSQDGLSRSLQGLFSL
PIQYAWAALRDPAGQQIAKAWAQQIAKPWEQVMAHRYPIAGGSNNEASVKDLQRFVDPDS
GLLPAFKRNEIGNLAGGEGLGVGDSKGPALVNPGMLNSIDKASSVGQVIASLSDRDNGFE
IMLEPSANFTDIVFTLDGQEQHYRNGRSSWNRFAWPGTSNAPGARLDVVTLSGARVTVFD
FPGRWGLLRMNESARVDDLDGIQQRFSWNTASGRVSLVVRNFGGVKLTDLGDVKALSALN
DRGGQ
NT seq 3798 nt NT seq  +upstreamnt  +downstreamnt
atgaaaacattactgcgtctgttgaagagtttctgggtgctgctgccattgctgtggctg
gcgagcctgttgattggctggctggtcgcgccgctggtgccgtggctgcgtcatcacgta
cctgaagcgctggccatcatcagtgcctgcttcctgctggtgatcgtgctgcgccagtac
cagcgcatccgcgccgagcacaacctggagaacctgctgcaaatcgaagtcgaccgctcg
tggaacgccacgggtgagttccgagaccaacaggtattgcgcgagcgcctgaagcacgcc
atcgccatgctgcgcaccgatcgctcagccggtggcggcggcaaggcggcgctgtccgac
ctgccctggtacctggtggtgggcatgtccgctgccggcaagacctcgctgctgacccat
tccggtctgtcggccagcatcgccacggccaacgacagtgaaagcggtacccagcattgt
gactggtacttcagccccgacgccgtaatgatcgacaccgccgggcgctacttgcgcgac
gaccagtcagccagtgagttctcggccttcctgcgcatgttgcgcaagcaacgcggcaag
gcggcgatcaatggcttggtgctggtggtcagcctgcccgagctgctggcggccaacagc
gatgagcgcaatgccctggcggcgcagctggtggcacgggtagaagaatacgccgaatgc
ctcgacgccaacccgccggtctacctgatgctgagcaagaccgaccagttaccgggcttc
agccaggcattcgacggcctcgacctgcatgagcgccagcaaccgctgggcatgaccttt
ggcctgtcggaaatccgcaacagtggcctgcacgccgtgctgcagacgcgcctgaagaac
ttgcagggtcacgttcgccagcacgtcgatgcgcagatgatcgccctcggcgccgaggcc
gacagtgcgctgttgaacttcccgcagtacttcgccgccctcagcgatgtactcgagcaa
ttcctcgaccacttcacgcgtggccatcgcggcgggaccccgctgctgctgcgtggcctg
tacttcaccagtgcgctgcagaccgggcagcagctgggacaagtctatgaagacgtcatc
gccgacgagttcgccttgcaagcggcctacgatgagcctgccgaacgtgctggcaagccc
gtgggcaaccgcagctacttcatcaccgacaccttccgccaggtgatattcccggaccgc
gacctgaccttgtaccagtcacgcctgggccggcaggccacgttcagcccgctgttactg
ggcctggccgttgccacgggtgtcctgttcatcggctggcaggcattgtcgttcatcaac
aaccggcagtggctcgatggcttgcgcgggcaactggcgcagatcgaacatgcgcaggat
cgcgagcaactgctggccgcaggcaagggcctggaagtgctgcgcggacagatggcggta
gtcgaagcccatcgcctgcaaggcgtccccctgctgttggctgctggcctttaccacggt
gaagcagtccatcaggtgagcagtgccgcatacctggcgcaattgcgcagccaggcgctt
gagccgatcacccgcagcctgcaagtgcagatgcgcgcgttcaacacattcgccaacggc
atcaaccaggaactggagttcaccccagcgccgctgcctaaaaaacgcaacggcaagcct
ctcgcccctgccttggccgccaaggccacagcagccaacacccgcctgggtggctacgcc
gccaaggtcaacctggccaccgccagcgatgccgccgagctgtccgccaccaccggtggc
ctgtcgttgtccgaagaaatgctcggccgacttgacgaacagcaggtggcctcgatcatc
gacgcctacaacacgctcaagatgtacctgctgctgaccgagccccagatacatccagat
ccggccttcgtcgctgccagcctgccccaggcctggacaggtgcagccgctgaaggggcc
ccggccgacgccggggtaatcgaagaaaacgcaccgctttacgtgcagttgctggagcaa
ggccaggcgccggcactgccgcgcaacgagcaacttatcgacgagacccggcagaacctc
aaggcattcatgatctccagctcgctggtcgatcgtgaatacctgcgcctgcaacttgag
tcgagccgccagttcccgacgttgagcctcaacgacctggtgccgcaaccgggccgtgcg
ctgctgtacgggtccgctggcgtgccagcaatctacacgcgccagggctgggacaccttc
gtcaagcccgaactgatcaagctggtgtcgggcaacctgcgcaacgagtcggactgggtg
ctggacggtgaaggcggcgacgcgctcgtgcaaaaagccaacttcgtgcgcgagttcatg
acccgctacaagcgcgactacacccaggcctggtacaagatggtcagcagcgtcggtgtg
cgccacttcaccgacctggcctcggccaccgagcaactgggcctgctcagtgacgtgcag
aactcgcctgtgaaaaacctgctggcggcggtcaatgacaacacccagtgggacctgccg
accaagcacgcgatcccggcccctggcgccgcccgcgatgacggtttctggagcaaggtc
acaggcttgttcgacaccgagaacgccctgcccaccagcgtcgccccggccctgccggcg
gtggacgatggcagcctggccaaacgtttcgagccggtggcgcgagtgtttgcgcaaaac
aacgccgaaggcgccgacagcaccatcatggaccgctacctggccgccttgcgcaagctc
aaggtacgcatgaacaacatccagcgttcgcaggatgtgggcaaaagcagcaagcagctg
atcagcgaaaccttggaaggccagccaagcgaagtcaccaccgtacgcaactatgtggag
agcagcgtcgacaccagccaggacggcttgtcccgctcactgcaggggctgttcagcctg
cccatccaatacgcctgggcggccctgcgtgacccggccggccagcagatcgccaaggcc
tgggcgcaacagattgccaaaccgtgggaacaggtcatggcgcaccgttacccgattgcc
ggcggcagcaacaatgaagcgtcggtgaaagacctgcaacgcttcgtcgacccggacagc
ggcctgctgcccgccttcaaacgtaacgaaatcggcaacctggccggcggtgagggcctg
ggtgtgggcgacagcaaggggccagcgctggtcaaccctggcatgctcaacagcatcgac
aaggccagctcggtgggccaggtgattgccagcctgtctgaccgtgacaacggcttcgag
atcatgctggagccgtcggccaacttcaccgacatcgtgttcaccctcgacggccaggag
cagcactaccgcaacggccgtagcagctggaaccgcttcgcctggccgggcaccagcaac
gcacctggcgcacgcctggacgtagtgaccctgagcggtgcgcgggtgaccgtgttcgac
ttcccggggcgctggggcttgctgcgtatgaacgaaagcgcccgcgtagacgacctggat
ggcattcagcaacgcttcagctggaacaccgccagtggtcgcgtgagccttgtggtgcgc
aactttggcggggtcaagctgaccgacctaggtgacgtcaaggcgctgagcgccctgaac
gacaggggcggccaatga

DBGET integrated database retrieval system