KEGG T00650: PputGB1

Pseudomonas putida GB-1: PputGB1_3546

Entry

PputGB1_3546      CDS       T00650

Name

(GenBank) DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

ppg Pseudomonas putida GB-1

Brite

KEGG Orthology (KO) [BR:ppg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppg03032]
    PputGB1_3546
   03400 DNA repair and recombination proteins [BR:ppg03400]
    PputGB1_3546
Enzymes [BR:ppg01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PputGB1_3546
DNA replication proteins [BR:ppg03032]
Prokaryotic type
  DNA Topoisomerases
   PputGB1_3546
DNA repair and recombination proteins [BR:ppg03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PputGB1_3546

SSDB

Motif

Pfam:

Topoisom_I Top1B_N_bact Metal_resist

Other DBs

NCBI-ProteinID:

ABY99437

UniProt:

B0KLQ9

Position

3948011..3949033

AA seq 340 aa
MLDCPLPRTLHYVDDSQPGMTRRRWRDRFIYLDADGQRVRDSDTLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRAQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVQVKGSTIRFQFRGK
RGVEHNVTLNDRRLASLLKRCMELPGQTLFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYAQGRLAQLPKSRVRKGLDPEEVALLLFLQVLEEQDGD

NT seq 1023 nt +upstreamnt +downstreamnt
atgctcgactgccccctgccacgcaccctgcactacgttgacgacagccagccaggcatg
acccggcgacgctggcgcgaccgtttcatctacctggatgccgacggccagcgggtgcgc
gacagcgacaccttggcgcgcatcgccgcgctggtgattcccccggcctacaccgatgta
tggatctgcgccgacccgcagggccacctgcaggccaccggtcgcgatgcccgtggccgc
aagcagtaccgctatcacgcgcagtggcgcgaactgcgtgaccaacacaagtatgggcgc
atgctggcctttgcccaggcactaccaaagctgcgcgcgcaactggaagcccacctggcg
cggccagggctggaccgggaaaaggtcatggcattggtggtgagcctgctggaccacacc
ctgatccgcattggtaaccagcgttacctgcgcgacaaccagtcttatggcctgacgacc
ctgcgtaaccgccatgtgcaggtcaaaggcagcaccattcgctttcaatttcgcggcaag
cgtggcgtcgaacacaacgtcaccctcaacgaccgacgcctggccagcctgctcaaacgc
tgcatggagctgcctggccagacactgtttcaatacctggacgaagacggccagcgccac
agcgtaggctccagcgaggtcaaccagttcctgcagcagttgaccggcgcagacttcacc
gccaaggactaccgcacctgggccggcagcagcctggcgttggacctgctcaaacccctg
gcctgggaaccggagagtgaagccaaacgccaggtcgccgcgatagtccgccaggtcgcc
acgcgcctgggcaatacgccggcagtgtgcagacgctgctacatccatccggcagtgctg
gagcactatgcccagggacgtctggcccaattgcccaagagccgcgtgcgcaaaggcctg
gaccccgaggaagtggccttgctgctgtttcttcaggtactcgaggaacaggacggcgat
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system