KEGG   Pseudomonas putida GB-1: PputGB1_5341
Entry
PputGB1_5341      CDS       T00650                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ppg  Pseudomonas putida GB-1
Pathway
ppg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PputGB1_5341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppg03400]
    PputGB1_5341
Enzymes [BR:ppg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PputGB1_5341
DNA repair and recombination proteins [BR:ppg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PputGB1_5341
SSDB
Motif
Pfam: Exo_endo_phos CbiK
Other DBs
NCBI-ProteinID: ABZ01223
UniProt: B0KQ93
Position
5965090..5965869
AA seq 259 aa
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLLLPSGMNGDEDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPERAWMDA
ITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcggatcatcagtgtgaacgttaatggcattcaggctgcagccgagcgtggattgctc
agctggttgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgacgacccagctttccagctcgatggctatttcctttatgcctgcgacgcg
gaggtgcccgcccaaggtggtgtggccctttattcgcgcatgcagcccaaggcagtcatc
accggcctgggcttcgagacagccgaccgctacgggcgttacctgcaagcagatttcgac
aaagtcagtattgccagcctgctgttgccttcgggcatgaacggcgacgaagacttgaac
cagaagttcaagttgatggacgacttcgccaagtacctggacaagcagcgtcgcaagcgt
cgcgaatacatctactgcggctcgttctacgtggcgcagcagaagctcgacatcaagaac
tggcgtgacagccagcagtcgccgggtttcctggcgccggaacgcgcctggatggatgcg
atcactggcgagatgggctacgtcgatgccctgcgcgaagtcagccgtgaaggcgaccag
tacagctggtggccagacaacgagcaggccgagatgctcaacctgggctaccggttcgac
taccagatcctcacgccgggcctgcgccgcttcgtgcgcaatgctcgcctgccgcgtcag
ccgcgcttctcccagcatgcgccgctgatcgtggactatgactggacgttgaccatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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