KEGG   Pseudomonas putida GB-1: PputGB1_5342
Entry
PputGB1_5342      CDS       T00650                                 
Name
(GenBank) ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
ppg  Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppg03016]
    PputGB1_5342
Enzymes [BR:ppg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     PputGB1_5342
Transfer RNA biogenesis [BR:ppg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    PputGB1_5342
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ABZ01224
UniProt: B0KQ94
Position
complement(5965931..5966653)
AA seq 240 aa
MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWL
TAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVI
QADGGTRTASITGAMVALCDALAVIKKRGGLKAGNPLKHMIAAVSVGMYQGEAVLDLDYP
EDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQAALAD
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaacgtccaagtggtcgcgccgccgatcagcttcgctcgatccgcatcacccgcaac
tacaccaagcacgccgaagggtcggtactggttgagttcggtgacaccaaggtcatttgc
acggtcagcgtggaaaacggtgtaccgcgcttcctcaaaggccagggccaaggctggctg
accgccgaatatggcatgctgccgcgctccaccggcgaacgtaaccagcgcgaagccagc
cgtggcaagcagggtggccgcaccctggaaatccagcgcctgatcggccgttcgctgcgt
gcggcgctcgacatgagcaagctcggtgacatcaccctgtacgttgactgcgacgtgatc
caggccgatggcggtacccgtaccgcgtccatcactggcgccatggtcgccctgtgcgat
gccctggcggtgatcaagaagcgcggtggcctcaaggccggcaacccgctcaagcacatg
atcgctgccgtgtcggtgggcatgtaccagggcgaagccgtactcgacctggactacccg
gaagactccgctgccgaaaccgacctgaacgtggtcatgaccagtgccggcggcttcatc
gaagtgcagggtactgccgaaggcgcaccgttccagccggaagacttcaacgccatgctc
gccctggcgcagaagggcatgaacgagatcttcgaactgcagcaggccgcactggctgac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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