KEGG   Pelodictyon phaeoclathratiforme: Ppha_0400
Entry
Ppha_0400         CDS       T00731                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pph  Pelodictyon phaeoclathratiforme
Brite
KEGG Orthology (KO) [BR:pph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pph03016]
    Ppha_0400
Enzymes [BR:pph01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Ppha_0400
Transfer RNA biogenesis [BR:pph03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Ppha_0400
 Prokaryotic type
    Ppha_0400
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACF42729
UniProt: B4SCE9
Position
386812..387537
AA seq 241 aa
MDEQRIREPLPDEGSFLLIDKPLDWTSFDVVAKIRNTYKQSGLKRKVGHCGTLDPKATGL
LILATGKKTKEIATLEVLDKVYDGAIKLGAMTESHDVETMEYGQCGVAHLTESEIRIAAS
TFEGRRQQQPPMHSAAWHNGKRLYEHARKGVVIKERKAKEIVIHRFEVIRVELPMVYFSL
HVSKGAYIRVIAHELGTLLGVGGYLASLTRVSIGPYALSSAKTVSDTVEDILQQASNALP
G
NT seq 726 nt   +upstreamnt  +downstreamnt
atggatgaacagcgaataagggagcctttacctgatgaaggcagttttctcctgatcgac
aagccactcgactggacgtcgtttgatgtggtcgcaaaaatcaggaatacctacaagcag
agcggtctgaagcgcaaggttggtcattgtggaacccttgatccaaaagcgaccggactg
cttatcctggcgacgggaaagaagacgaaagagatcgcaacgctcgaagtgctcgacaag
gtttacgatggagccataaagcttggcgccatgacggaaagtcacgatgttgaaacgatg
gaatatggccagtgcggcgtggcacatctgacggaaagtgagattcgcatcgcagcctca
acttttgaagggaggcgtcagcagcaaccccccatgcactctgcagcctggcataatgga
aaacgcctctatgagcatgcccgcaagggagtggtgatcaaagagcgaaaagcaaaagag
attgttattcaccgttttgaggttatccgggttgagcttccgatggtctatttttccctt
catgtttccaagggagcctatatcagggttattgcccatgaactcggcactctgcttggt
gttggaggctatctggcctccctcacacgagtctctattggcccttatgcgctgagttca
gccaaaacagtttcagacaccgttgaagatattcttcagcaggcatcaaacgccctcccg
gggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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