KEGG   Pseudoalteromonas phenolica: PP2015_3122
Entry
PP2015_3122       CDS       T04165                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pphe  Pseudoalteromonas phenolica
Pathway
pphe03030  DNA replication
pphe03410  Base excision repair
pphe03420  Nucleotide excision repair
pphe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pphe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PP2015_3122
   03410 Base excision repair
    PP2015_3122
   03420 Nucleotide excision repair
    PP2015_3122
   03440 Homologous recombination
    PP2015_3122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pphe03032]
    PP2015_3122
   03400 DNA repair and recombination proteins [BR:pphe03400]
    PP2015_3122
Enzymes [BR:pphe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PP2015_3122
DNA replication proteins [BR:pphe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PP2015_3122
DNA repair and recombination proteins [BR:pphe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PP2015_3122
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PP2015_3122
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: ALO43601
UniProt: A0A0S2K5K2
Position
I:complement(3551773..3554520)
AA seq 915 aa
MSQIPENPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLVRQFNPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSITGVEADDVIGT
FARIASEQQRHVLISTGDKDMAQLVNEHVTLINTMTDTVLDPQGVVDKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGIGSIKSLYDRLDDIAGLGFRGSKTMAKKLEEHK
AQLDLSYELATIKLDVEVEQNLETFAIADMNKDRLIELYGQCEFKRWLSELLDGKEAPKT
AAEQAQPEAKKIEAHYETILTEAQLTTWAEKLKSAELMAFDTETTSLDYMQADLVGMSFA
VKEGEAAYLPIAHDYMGAPEQLSKEFVFEVLGPVLADDSVKKVGQNLKYDKSVLARAGLE
LNGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEEIAGKGKSQLTFNQIELEKA
APYAAEDADITLRLHNQLWPMLKEQSELLPVFNEIELPLLSVLSDIERTGVKIDSQMLAE
QSVEIAARLTELEKEAYEIAGEEFNLSSTKQLQAILFDKLGLPVLKKTPKGAPSTAEEVL
QELAHDYPLPKLIIEHRGLAKLKSTYTEKLPKLVNPETGRVHTSYHQAVTATGRLSSSDP
NLQNIPIRNEAGRRIRQAFIADEGHVILAADYSQIELRIMAHLSQDAGLLKAFAEGKDVH
SATASEVFGVPLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDIPRNEAQHYMDKYFER
FPGVLEYMERTREEAAEKGYVETLFGRRLHLPDIKARNGARRKAAERAAINAPMQGTAAD
IIKKAMLKVAQWLATQTTNDIKLLMQVHDELVFEIAKDKVEAFSEHICSLMSEAASLDVP
FLVEADYGENWEQAH
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgtctcagatccccgaaaatcctttgatcttggtcgatggttcttcttatttattccgt
gcgtatcatgctccaccgcatttaaccaattcaaaaggtgaggcgacgggtgccatctat
ggtgtgatcaatatgttgaagagcctcgttaggcaatttaacccaagccatatggttgtg
gtatttgacgccaagggtccgacatttagaaatgaaatgtacagcgaatataaagcgcac
cgcccgccaatgcctgatgatctgcgtacgcaaattgaaccgatccatgagatcatcaaa
gcgatgggtttacctttagtcagcatcacaggtgttgaggccgatgatgtgattggtact
tttgcgcgcattgcgtctgagcagcagcgtcatgtgttgatcagcacgggcgataaagat
atggctcaactcgtgaatgagcatgtcaccttaattaataccatgactgacaccgtactc
gatccacaaggggtggttgataaatttggtattggtcctgagcttatcattgattatctc
gcgctgatgggtgataaagtcgataacatcccaggcgtgcctggtgtgggtgaaaaaact
gcactggctatgctacaaggcattggttctattaagtcactttatgacagattagatgac
attgcaggtcttggtttccgtggttctaaaaccatggctaaaaagctagaagaacataaa
gcgcagctagatctgtcttatgaattagcgaccattaaactagacgttgaagttgagcaa
aacctagagactttcgcgattgctgacatgaataaagatcgtttgatcgaactttatggg
caatgtgaatttaagcgttggcttagtgaattactcgacggtaaagaagcgcctaaaact
gcagcagagcaagcacagcctgaagctaaaaaaatcgaagcacattacgaaaccatttta
actgaagcacagttaactacatgggccgaaaagcttaaaagtgctgagcttatggcattt
gatacagaaacgacgagcttagactacatgcaagctgatttagtcggtatgagctttgcc
gtgaaagaaggtgaagccgcttatttaccgattgcgcatgattacatgggcgcgccggag
caactttcgaaagagttcgtattcgaggtgctaggcccagttttggctgacgacagtgtg
aaaaaagtgggccagaaccttaaatacgataagagtgtgttagcccgagccggcttagaa
ctcaatggtatcgcttttgatactatgctcgagtcttatgtctttaatagtgtgggcaca
cgtcatgatatggattcactggcactaaaatatttaggtcataagaatatcagctttgaa
gaaattgccggtaaaggtaaatcgcaattgaccttcaatcaaattgagttagagaaagcc
gcaccttatgcggcagaagacgcggacattacattacgcttgcataaccaactttggcct
atgctgaaagagcaatcagagctgctacctgtatttaacgagatagagctgccgttatta
tctgtgttatcagatatcgaacgtaccggtgtgaaaatcgatagccaaatgttggctgag
caaagtgtcgaaatcgccgctcgcctgactgaacttgaaaaagaagcgtacgagatcgca
ggcgaagaatttaacttaagttcgactaagcaattacaagcgatcctatttgacaagctt
ggcttgccggtattgaagaaaacccctaaaggtgccccttcaacggctgaagaagtactg
caagaattagcacatgattatccgttgccgaaacttatcattgagcaccgtggtttagct
aagcttaaatctacttatactgagaagctgcctaagcttgtgaaccctgaaacgggtcgt
gtacatacctcttatcatcaggctgtgaccgcaacaggtcgattaagctcaagcgatcca
aacttacagaatattccaatccgaaatgaagcgggtcgtcgtattcgtcaggcatttatt
gccgatgaagggcacgtgatcttggcggcggactacagccagattgaattgcgtattatg
gcgcacttgtcacaagatgcaggtttactgaaagcatttgctgaaggcaaagacgtacac
agcgcaacggcttctgaagtattcggtgttccgcttgaagaggtcacatcggatatgcgc
cgtaaagcgaaagcggttaacttcggtttgatctacggcatgagtgcgtttggtttggcc
cgtcagctagacattccgcgtaatgaagcacaacattatatggataagtattttgagcgc
ttcccaggtgtacttgaatatatggaacgtacgcgcgaagaagcagctgaaaaaggttat
gttgaaacgctatttggtcgtcgcttgcacctgcctgatattaaggcaagaaatggcgcg
cgtcgcaaagcggctgaacgtgcagcgatcaacgcaccaatgcaaggtacagcggctgat
attatcaaaaaagccatgctgaaagtggcacaatggcttgctacacaaacgaccaatgac
atcaaattacttatgcaagtacacgatgaattagtatttgaaattgcgaaagataaagtt
gaagcgtttagcgaacatatttgttctttaatgagcgaagcggccagtttagatgtgcca
tttttagttgaagctgattacggcgaaaactgggaacaagcacactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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