KEGG   Pannonibacter phragmitetus: APZ00_12410
Entry
APZ00_12410       CDS       T04214                                 
Name
(GenBank) ABC transporter
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
pphr  Pannonibacter phragmitetus
Pathway
pphr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APZ00_12410
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pphr02000]
    APZ00_12410
Transporters [BR:pphr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    APZ00_12410
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_16 AAA_29 Mg_chelatase AAA_22 AAA AAA_25 nSTAND3 nSTAND1 AAA_5 NACHT RsgA_GTPase AAA_33 CbiA AAA_24 NB-ARC DUF87 TsaE IstB_IS21 PhoH FtsK_SpoIIIE MeaB ABC_ATPase
Other DBs
NCBI-ProteinID: ALV27763
UniProt: A0A0U3PG28
Position
complement(2669345..2671003)
AA seq 552 aa
MTKPLAEIQDLHVEARTDSGRRVEIIKGVSLTINPGEIVALIGESGSGKTTIALTLMGYT
RAGCKISGGKVLLGGQDLVTMSEASRQKLRGTDVAYVPQSAAAAFNPSHRLIDQVVEVAS
IHKLMSRTEARAKAVELFRALALPDPETIGERYPHQVSGGQLQRLAAAMALIGGPQLVIF
DEPTTALDVTTQIEVLRAFKSVMRKGGMAGVYVSHDLAVVAQIADRIIVLKGGEIQEEGS
TQQILHAATHPYTKELLAAFQPVPFAAPAEAEVDMPVKRPILEVSGVYAGYGPLEPTGLP
FKTVLKNVSCKLERGHNLGVIGESGSGKSTLARVIAGLLPPVRGHVQLDGHEVDPRARQR
GKEELRRMQIVFQLADTALNPSRSVADILGRPLAFYHGQKGAAQEARVNELLDMVQLPRA
LRHRMPGELSGGQKQRVNFARALAAKPDIILCDEITSALDTVVAAAVIELLKELQRELGL
SYVFISHDLSTVQSICDQVMVMQHGEMVELLANDQLPGGATHPYSKLLFSSVPKLDTGWL
DSLPENFASTAA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgaccaaacctcttgccgaaatccaggacctgcacgtcgaagcccgcaccgactcgggc
cgccgggtggagatcatcaagggcgtcagcctgaccatcaatccgggcgagatcgtcgcg
ctcatcggcgaaagcgggtcgggcaagaccaccatcgccctcaccctgatgggctacacc
cgtgccggctgcaagatcagcggcggcaaggtcctgctcggcggccaggatctggtgacg
atgagcgaagcctcgcgccagaagctgcgcggcacggatgtggcctatgtgccgcaaagt
gcagccgccgccttcaatccgtcccaccggctgatcgatcaggtcgtcgaggtagccagc
atccacaagctgatgagccggacggaagcccgcgccaaggccgtggaactgttccgcgcc
ctcgccctgcccgatccggaaaccatcggcgagcgctatccgcatcaggtctccggcggc
cagctgcagcgccttgccgctgccatggctctcatcggcggcccgcagctcgtcatcttc
gatgagcccaccaccgcgctggacgtcaccacccagatcgaggtgctgcgcgccttcaag
tccgtcatgcgcaagggcggtatggccggtgtctatgtctcgcacgaccttgccgtcgtc
gcgcagattgcggaccggatcatcgtgctcaagggcggtgagatccaggaggaaggctcg
acacagcagatcctgcatgcggccacccacccttatacgaaagagcttctggccgccttc
cagccggtgcccttcgcagcccctgcggaggctgaggtggacatgcccgtcaagcggccc
atcctcgaagtcagcggcgtttacgcaggctatggcccgctcgaaccgaccggcctgcct
ttcaagaccgtgctaaagaacgtcagctgcaagctggagcgcgggcataatctcggcgtc
atcggcgaaagcggctcgggcaaatccaccctcgcccgcgtcatcgctggcctgctgccg
ccggtgcgcggccatgtgcagctggatggccacgaggtcgatccgcgcgcaagacagcgc
ggcaaggaagaactgcggcgcatgcagatcgtcttccagctggccgacaccgcgctgaac
ccgtcccgctccgtcgccgacatccttggccgtccgcttgccttctaccatgggcagaaa
ggcgctgcgcaggaggcccgcgtcaacgagcttctggacatggtgcaattgccccgcgcc
ctgcgccaccgcatgccgggtgaactctccggcgggcagaagcagcgcgtcaacttcgcc
agagcccttgccgccaaaccggacatcatcctgtgcgacgaaatcacctccgccctcgac
acggtggtggcggcagccgtgatcgagctgctgaaggagctacagcgggagctgggtctc
tcctacgtcttcatcagccacgacctctccaccgtccagtcgatctgtgatcaggtgatg
gtgatgcagcacggcgagatggtggagcttctggccaacgaccagctgccgggcggcgcc
acccacccctattccaagctgctcttctcctccgtgccgaaactcgacaccggctggctc
gacagcctgcccgagaatttcgccagcacggcagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (2)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (40)   

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