KEGG   Pseudomonas putida ND6: YSA_00347
Entry
YSA_00347         CDS       T02170                                 
Name
(GenBank) hypothetical protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi02025  Biofilm formation - Pseudomonas aeruginosa
ppi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YSA_00347
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    YSA_00347
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppi02044]
    YSA_00347
Secretion system [BR:ppi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YSA_00347
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AFK66963
UniProt: I3UN92
Position
184737..185252
AA seq 171 aa
MPTPAYIKIVGQTQGNITAGAFTADSVGNVFQQGHEDQILVQEIKHEVTTPTDPQSGQPS
GQRVHKPFIFTSSLNKATPLMYQALATGEMLPTVEVSWYRTSEEGKQEHFFTTTLEDATI
VSINTVLPHALDKDNENYTQLIEVSLAYRKITWAHDVANTEGSDDWRNPIA
NT seq 516 nt   +upstreamnt  +downstreamnt
atgccaacacccgcttacatcaagatcgtaggccagacccaaggcaacatcaccgctggc
gccttcaccgctgactccgtcggcaacgtgttccaacaaggccatgaagatcaaattctg
gttcaggaaatcaagcatgaggtgactacgcccactgacccccagagcggtcaaccgagt
ggccagcgcgtgcataagcctttcatattcaccagttcactgaacaaagctacccccctg
atgtatcaggcacttgccaccggcgaaatgctgccaacggtcgaagtcagctggtatcgc
acctcggaggaaggcaagcaagagcactttttcacgaccacgctagaagacgccaccatc
gtcagcatcaataccgtgcttccccatgcactcgacaaagacaatgaaaactacacacaa
ctgattgaagtatccctggcgtatcgaaagatcacgtgggctcacgatgtagccaatacc
gaaggttctgacgactggcgcaatccgatcgcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

Download RDF
DBGET integrated database retrieval system