KEGG   Pseudomonas putida ND6: YSA_04627
Entry
YSA_04627         CDS       T02170                                 
Name
(GenBank) outer membrane porin
  KO
K18093  imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi01501  beta-Lactam resistance
ppi02020  Two-component system
Module
ppi_M00745  Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    YSA_04627
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    YSA_04627
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppi02000]
    YSA_04627
   01504 Antimicrobial resistance genes [BR:ppi01504]
    YSA_04627
Transporters [BR:ppi02000]
 Other transporters
  Pores ion channels [TC:1]
   YSA_04627
Antimicrobial resistance genes [BR:ppi01504]
 Gene sets
  beta-Lactam resistance modules
   Imipenem resistance, repression of porin OprD [MD:M00745]
    YSA_04627
SSDB
Motif
Pfam: OprD
Other DBs
NCBI-ProteinID: AFK69279
UniProt: I3UUV8
Position
2516407..2517669
AA seq 420 aa
MIRATHGPGRALLATLALCPALSHAEAPGWSLLSRNYFLHSDFRSPSGSGQNYRQEWAQG
FIGEVRSGFTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAESEYSSAGAALK
MQLGNTQLRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDN
SSTHDDFSGYGATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLNVAEGNWR
LDGNLYKTRDTGNASAGAIDTLAYSLLARYSFGAQALSLAYQKVEGDTPFDFVGGDAIYL
ANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQY
GDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGNDIDRIYLIIEYPLKGSF
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgatccgcgccactcacggaccaggccgcgccctgctcgccaccctcgccctgtgcccg
gcgctcagccacgccgaagcgcccggctggtcgctgctcagccgcaactatttcctgcac
agtgacttccgctcgccctccggcagcggccagaactaccgccaggaatgggcccaaggc
ttcatcggcgaggtccgttccggcttcaccgaaggcactgtcggcgtcggcatcgatgcc
catggctttcttggcctcaagctcgacggcggccgcggccatagcggcaccggcctgctg
ccacgcgacagcgatggccgcgccgagtccgagtactccagcgccggtgccgcgctcaaa
atgcagttaggcaacacccaactgcgctatggcgagatgatggtggaaaccccggtgttc
gacaccggtgacaaacgcctgcacccggaatacgccaccggctggtgggtggaaaacacc
gaccagcccgactggcgcctgcaggccgggcgtttcactgccttcaacaaccaggacaac
agctccacccacgacgacttcagcggctacggcgcgaccacccacaaccgggccatcagc
ctggccggtgccaccttcgcacccaacgggccgttcggcgccgcactgtatgccgggcag
ctggaaaacacctggcgccaggcctacctcaacctgaacgtggccgagggcaactggcgc
ctggacggcaacctgtacaaaacccgcgataccggcaacgccagcgccggggcgatcgac
accctcgcctacagcctgctggccaggtacagcttcggcgcacaggcgctgagcctggcc
taccagaaggtcgagggcgacaccccgttcgacttcgtcggcggcgacgccatctacctg
gccaacgcgatcaagtacgccgacttcaacggccctggcgagcactcgtggcaactgcgc
tatgacctgaacttcgccaccctcggcgcgcctggcctgagcctgatgggccgctatgtc
agcggccgcggcatcgacggcagccatgcgcctgcgggcggcgcctatgtgaaccagtac
ggcgacggcggcaagcactgggaacgcgacatcgacctgaaatacgtggtgcagtcgggg
gctgccaaggacctgagcctgtcgttctcccacgtcagccaccgcgccaaccaggcccag
gcgggcaatgatatcgaccgcatctacctgatcatcgaatacccactcaaaggcagcttc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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