KEGG   Pseudomonas putida ND6: YSA_06068
Entry
YSA_06068         CDS       T02170                                 
Name
(GenBank) IspA
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00900  Terpenoid backbone biosynthesis
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    YSA_06068
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ppi01006]
    YSA_06068
Enzymes [BR:ppi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     YSA_06068
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     YSA_06068
    2.5.1.29  geranylgeranyl diphosphate synthase
     YSA_06068
Prenyltransferases [BR:ppi01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   YSA_06068
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: AFK70053
UniProt: I3UX32
Position
complement(3281119..3282006)
AA seq 295 aa
MIGTYQASCQARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGA
PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHK
TGALIEASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYAIELRDQALAALQGFGETAEPLRALARYIVERRN
NT seq 888 nt   +upstreamnt  +downstreamnt
atgattggcacctaccaggccagttgccaggcccgagtcgacgcagccctcgaaccgctg
ttcatcgccccgagcaaagagctggaacgcctctacgccgccatgcgctacagcgtgatg
aacggcggcaaacgcgtgcgcccgctgttggcctatgcggcctgcgaagccttgggcgcc
ccggccgaacaagccaacggcgcagcctgcgcggtagagctgatccatgcttactcgctg
gtgcatgacgacctcccggccatggacgacgacgacctgcgtcgcggccagccgaccacc
cacaaggcgtttgacgaagcgtgcgcaatcctcgcgggcgacggtttgcagagcctggct
ttcagtgccctgctcgacccatgcctgagccctcagatcgacagcattcgcctggccatg
gttcaggtactggccaaagctgccggcccggccggcatggttggcggccaggcgatcgat
ctcggttcggtgggccagaagctggaccagcaggcgctggagttcatgcaccggcacaag
accggcgcgctgatcgaagccagcgtacgcctcggcgccctggccagtgcccgtgccgaa
ccggcgcagctggatgccctgcagacttatgcacaggccattggccttgcattccaggtg
caggacgacatcctcgacgtggaaagcgacactgctaccttgggcaaacgccaaggtgca
gacatagcgcgtgacaaaccgacctacccggccctgctgggcctggaagccgccaaagcc
tatgcaatcgaactgcgcgaccaggcgctggctgcactgcaagggttcggcgaaacggcc
gaaccgctgcgggccttggcgcgttacatcgtcgaacgccgtaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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