KEGG   Pseudomonas putida ND6: YSA_08937
Entry
YSA_08937         CDS       T02170                                 
Name
(GenBank) extracellular solute-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YSA_08937
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppi02000]
    YSA_08937
Transporters [BR:ppi02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    YSA_08937
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AFK71598
UniProt: I3V1H7
Position
4850509..4852119
AA seq 536 aa
MSVIPTLWAGVFAASLALTSVPAALAKTPADQLIVGMSMINLLSLDPAAATGLDVSEVNA
NLYDMLLVQDVRQPDRLLPALAESWQVSDDRKTLTFNLRQGVTFQSGNPLSAEDVAWSLQ
RVLKLNLALASTWKAYGFSAGNVDQHMRAVDDSTFVIELPRPTDPLLVLNTLATSPSAFI
LDRKVVQQHQKGDDMGSAWLATHAAGSGPFVLKEWRANDVILMNRFDGYWGGPAKLKRIV
MRNMTESQSLRLMVERGDLDLAKGMSAPDIEALEKSDNVRTQTVQRGTLYYVALSVKNKP
YDDVRVRRAVRSLIDYQGINQTVMPHYGQLNQRPLPLGLAARLDDPGYALNVAEAKKLLA
EAGYPEGFKTTIRVLTEPPFINIASSLQSTLAQAGIKATIVTGTGNQIYGAMRERSFDIL
VGRGGGGAERHPHSSLRTLVYNPDNRDEAKLSNFQGWRTSFYSPELNNLIEQAEVEPDKA
QQLAQYQQIQKTLDEQVGAILPVSQMTDTVVLYHDVQDYQGHTAATTRYKDVYKSR
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgagcgttatccccacactctgggcgggggtctttgctgcgtctctggcgctgacctcg
gtacctgctgctttagcgaaaaccccggcggatcagttgatcgtcggtatgagcatgatc
aacctgctgtccctcgacccggcggcggccaccgggctggatgtgtccgaggtcaatgcc
aacctctacgacatgctgctggtgcaggacgtacgtcagccggaccggctgctaccggcg
ctggcagaaagctggcaggtcagcgatgaccgcaagaccctcacgttcaacctgcgccag
ggcgtaacgttccagtccggtaacccgctaagtgccgaggatgtcgcctggtcgctgcag
cgcgtactcaaacttaacctggccttggcgtcgacctggaaggcctacgggttttctgcg
ggcaatgtcgaccagcacatgcgcgctgttgatgactcaaccttcgtcatcgagctaccg
cggccgactgacccgttgctggtgctgaataccctggcaacttcgcccagcgcattcatc
ctcgaccgcaaggtggtgcagcagcaccagaagggcgatgacatgggcagtgcctggctg
gccacccacgcggctggtagcgggccgttcgtgctcaaggagtggcgcgccaacgatgtc
atcctgatgaaccgttttgacgggtactggggtggcccagccaagctcaagcgcatcgtc
atgcgcaacatgaccgagtcgcagtcactgcggttgatggtggagcggggcgacctggac
ctggccaagggcatgtccgcgccagacatcgaggcgctggagaagtctgacaacgttcgt
acccagaccgtgcagcgcggaacgttgtactacgttgccctgagcgtgaagaacaaaccc
tacgacgatgtgcgcgtacgccgggcggttcgttcgctgatcgactatcaaggcatcaac
cagaccgtgatgccgcactatggccagctcaatcagcgcccgctaccgcttggcctggca
gcaaggctggatgatccgggctatgccctgaacgtggccgaagcgaaaaaactgctggcc
gaagcgggctaccccgagggcttcaagaccaccatccgcgtgctcaccgagccacctttc
atcaacattgcgtccagcctgcagtcgaccttggcccaggccggtatcaaggccaccatc
gtcaccggtaccggcaaccagatctacggtgccatgcgtgagcgcagcttcgacatcctg
gtcgggcgcggcggcggtggtgctgaacggcatccgcattcaagcctgcgcaccctggtg
tacaacccggacaaccgcgacgaagccaagctgagcaacttccagggctggcgtacctcg
ttctacagccccgagctgaacaacctgatcgagcaggcggaagtcgaacccgacaaggcg
cagcaattggcccagtaccagcaaatccagaaaaccctggacgagcaggtgggggccatc
ctgcctgtgtcgcagatgaccgacaccgtggtgctctaccacgatgtgcaggactaccaa
ggccataccgcggccaccacccgttacaaagacgtctacaagtcgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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