KEGG   Phaeobacter piscinae: PhaeoP14_00279
Entry
PhaeoP14_00279    CDS       T05105                                 
Symbol
sucD
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
ppic  Phaeobacter piscinae
Pathway
ppic00020  Citrate cycle (TCA cycle)
ppic00640  Propanoate metabolism
ppic00660  C5-Branched dibasic acid metabolism
ppic01100  Metabolic pathways
ppic01110  Biosynthesis of secondary metabolites
ppic01120  Microbial metabolism in diverse environments
ppic01200  Carbon metabolism
Module
ppic_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppic_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PhaeoP14_00279 (sucD)
   00640 Propanoate metabolism
    PhaeoP14_00279 (sucD)
   00660 C5-Branched dibasic acid metabolism
    PhaeoP14_00279 (sucD)
Enzymes [BR:ppic01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     PhaeoP14_00279 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-ProteinID: ATG38411
Position
complement(310380..311264)
AA seq 294 aa
MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLNLPVFNSVHEA
KHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDSKSRLI
GPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTAVGIGG
DPIKGTEHIDVLDMFLNDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIGK
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcagtcctcatcgacgaaaacaccaaggtcatctgtcagggcttcaccggctcgcag
ggcacattccactccgaacaggccatcgcctatggcaccaagatggtcggcggcgtgaca
ccgggcaagggtggccagacccacctgaacctgccggtcttcaactccgtgcatgaagcc
aagcatgtgaccgaggcgaatgcctctgtgatctacgtgccgccccccttcgcagctgac
tccatccttgaggccatcgatgccgagatggagttgattgtctgcatcaccgagggcatc
ccggttctggacatgatgaaagtcaagcgggcgctggaagacagcaaatcgcgcctcatt
ggcccgaactgccccggcgtgatcacgcctgatgcctgcaagatcggcatcatgcctggc
cacatccacaagcgtggctcggtcggtgttgtgtcccgctcgggcaccctgacctatgag
gcggtgaagcagaccgcagacatcggtctgggccagtccaccgctgtcggcatcggcggc
gacccgatcaaaggcaccgagcacatcgacgtgctggacatgttcctgaacgatgatgaa
acccagtcgatcatcatgatcggtgaaatcggtggctccgctgaagaagaagccgcagaa
ttcatcgccgagcagaagaaaaaaggccgctggaagcccatcgcgggctttatcgcaggc
cgcacagcccctccgggccgccgcatgggtcacgctggcgcgatcgtcgcaggcggcaaa
ggtggtgccgaagacaagatcgaggcgatgaaatccgctggtatcgtcgtcgccgacagc
cccgccacactgggcgaggccgtgctgaaggccatcggcaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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