KEGG   Phaeobacter piscinae: PhaeoP14_03200
Entry
PhaeoP14_03200    CDS       T05105                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppic  Phaeobacter piscinae
Pathway
ppic00300  Lysine biosynthesis
ppic00470  D-Amino acid metabolism
ppic01100  Metabolic pathways
ppic01110  Biosynthesis of secondary metabolites
ppic01120  Microbial metabolism in diverse environments
ppic01230  Biosynthesis of amino acids
Module
ppic_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PhaeoP14_03200 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PhaeoP14_03200 (dapF)
Enzymes [BR:ppic01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PhaeoP14_03200 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ATG41239
UniProt: A0A0C2H272
Position
3344400..3345245
AA seq 281 aa
MPEMTIGSDTRLPFMKMHGLGNDFVVVDARDQTWDITPAMAEGIAHRQMGIGFDQLTVIT
KGDEDAHLTFYNADGSTSAACGNATRCIARHLLDESGKTHLRLTTDRGLLLAEDAGNGLT
SVNMGQPQLNWQDIPLAEDVDTLELPIEGAPTATGMGNPHCTFFVENAEVIPLAEFGARY
EHHPLYPERTNVQVAHVVAPDHLRMRVWERGVGITLASGSSSCATAVAAVRRGLTGRKVQ
IDLDGGTLWIDWREDGVWMTGPTMHVADGHFTRQFLESLSK
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcccgaaatgaccataggatcagacacccgcttgccctttatgaaaatgcatggcctc
ggcaacgatttcgttgtggtggacgcgcgcgatcaaacctgggacatcaccccggccatg
gctgagggaatcgcccatcgccagatggggatcggatttgatcagctgacggtcatcacc
aagggcgacgaggacgcacatctgacgttctacaacgccgatggatcaacctccgccgcc
tgtggcaatgccacccgctgtattgcacgccatctgctggatgaaagcggcaagacccac
ctgcgcctgaccaccgatcgtggcctccttctggcggaagatgccggaaacgggctcacc
tccgtcaacatgggtcaaccgcagctcaactggcaggatatcccgctggccgaggatgtc
gatacgctcgaactccccatcgaaggggcgccgaccgccaccggcatgggcaacccgcat
tgcaccttttttgtggagaacgcagaggtgattccgctcgctgaatttggcgcccgctac
gaacaccacccgctgtatcccgaacgcaccaatgtgcaggtcgcccatgttgtcgccccg
gaccatctgcggatgcgggtctgggaacgcggtgtcggcatcacgctggcctccggctcc
tcctcctgcgcaacagccgtggccgctgtgcgtcgcgggctgacgggacgcaaggtgcag
attgatctggacggcggcacgctctggatcgactggcgcgaagacggcgtctggatgacc
ggccccaccatgcatgtggccgacggccatttcacccgccaattcctcgaaagcctctcc
aagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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