KEGG   Pseudoalteromonas piscicida: B1L02_01360
Entry
B1L02_01360       CDS       T04942                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ppis  Pseudoalteromonas piscicida
Pathway
ppis03030  DNA replication
ppis03410  Base excision repair
ppis03420  Nucleotide excision repair
ppis03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1L02_01360
   03410 Base excision repair
    B1L02_01360
   03420 Nucleotide excision repair
    B1L02_01360
   03440 Homologous recombination
    B1L02_01360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppis03032]
    B1L02_01360
   03400 DNA repair and recombination proteins [BR:ppis03400]
    B1L02_01360
Enzymes [BR:ppis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B1L02_01360
DNA replication proteins [BR:ppis03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B1L02_01360
DNA repair and recombination proteins [BR:ppis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B1L02_01360
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1L02_01360
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: ASD65825
Position
1:291707..294463
AA seq 918 aa
MSQIPQNPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEADDVIGT
FSKIASEQSRHVLISTGDKDMAQLVNEHVTLINTMTNTILDPEGVVDKFGIGPDLIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGLGSIDSLYENLDKIADLGFRGSKTMAKKLEEHQ
AQLKLSYELATIKLDCEVEQDLEQFKIAEMNKDRLIELYGQCEFKRWLAELLDGQSQADI
VDVEAEGSAPAAAQVDTQYETILTKTQLDDWVTKLKAAELIAFDTETTSVNYMQAELVGM
SFAVAPGEAAYLPINHDYVGAPEQLSQDVVFEIMAPLLADPQIKKVGQNLKYDQSVLARA
GLELQGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKTISFEDIAGKGKNQLTFNQIEL
EKAAPYAAEDADITLRLHQHLWPLIEKENSLKQVFSEIELPLLSVLSRIERTGVHIDGDM
LAKQSIEIEKRLGELEQQAFEIAGEEFNLSSTKQLQAILFDKLELPVIKKTPKGAPSTAE
EVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNADTGRVHTSYHQAVTATGRLSS
SDPNLQNIPIRNEAGRRIRQAFVADSNKQIVAADYSQIELRIMAHLSQDKGLLSAFAEGK
DVHSATASEVFSVPLEEVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDMY
FERFPGVLEYMERTREEAADKGYVETLFGRRLYLPDINARNGARRKAAERAAINAPMQGT
AADIIKKAMIKVDEWLQSCDSNDIQLLMQVHDELVFEVHSDKVAEYSEKICELMSAAASL
DVPLLVEADSGDNWEQAH
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgtctcagatccctcaaaatccgttgatcttggttgatggttcttcctatttatttcgt
gcttatcatgcgccaccacatttaacaaactcaaaaggtgaagcaactggtgcgatctac
ggtgtgatcaatatgcttaagagtttgcttaaacaatatcaaccaagtcatatggtagta
gtcttcgacgctaaagggccgacttttcgcaacgaaatgtatagcgagtataaagcgcat
cgcccgcctatgccggatgatctgagaacgcaaattgagccgatccacgaaataattaaa
gcaatgggtttgccactggtaagtataagtggtgtcgaggctgatgacgtgatcggtaca
ttctcaaaaatagcgtcagagcaaagtcgccatgtgctaatcagcactggtgataaggat
atggcgcaattggtcaatgaacatgtcacgttgatcaataccatgacaaatacgatctta
gacccagaaggggtggtggataagtttggcattggtcctgacctgatcatcgactatctc
gcgttaatgggagataaagtcgataatattccgggcgtacctggcgttggtgaaaaaacc
gcattagcgatgctacaggggttgggctctatcgattcgctctacgaaaacttagataaa
attgctgatttaggttttcgtggctcaaaaaccatggcgaagaaactagaggaacaccaa
gcgcagttaaaactgtcgtatgaattagccactattaagctggattgtgaagtagagcaa
gacttggagcaattcaagatagctgagatgaataaagatcgcttaatcgagctatatggt
cagtgtgaatttaagcgctggttagctgagttactggatggtcagtcacaagctgatatc
gttgatgtggaggctgaaggctcggcacctgcagcggcgcaggttgacacccaatacgag
acgattttgacaaaaacgcagcttgatgactgggtaactaagctaaaagctgcggaactc
atcgcctttgatactgaaaccaccagtgttaactatatgcaggcggaactagttgggatg
agctttgcagttgcaccaggcgaagcggcttacttaccaattaatcacgattatgtgggg
gcgcctgaacagctttctcaagacgttgtgtttgagatcatggcaccgctgcttgcggat
cctcagatcaaaaaagtgggtcaaaatttaaaatacgatcaaagtgtgctcgcccgagca
gggctggaactgcaaggtattgcttttgatactatgttggagtcttacgtatttaacagc
gtaggtactcgccacgatatggattccttagcactaaaatatttaggccataaaacaatt
agttttgaagacattgctggcaaaggtaaaaaccaactgacctttaaccaaattgagcta
gagaaggcggcgccttatgcagcggaagatgcggacattacgctgagattgcatcaacac
ctgtggccgttaattgaaaaagaaaatagcctaaagcaggttttttcagagattgaatta
ccgctactgagcgtactttctcgcattgaacgcaccggtgtgcacattgatggtgatatg
ctcgcgaagcaaagtatcgagattgaaaaacgcttgggtgagcttgaacaacaagctttt
gaaattgcaggtgaggagttcaacctgagttcaacaaagcaactacaagcgatattgttc
gacaaacttgagctgccagtgattaagaaaacgccaaaaggcgcgccttcaacggctgaa
gaagtgctacaagagttggcgcatgattatccgctgccaaaactgattattgagcaccga
ggcttggctaagctgaaatccacctataccgacaaattaccaaaattggttaatgcggat
actggtcgcgtgcacacttcttatcaccaagccgttaccgcaacgggccgtctaagctca
agcgatcctaacttgcaaaatattccgatccgcaatgaagctggacgtcgtattcgtcag
gcctttgttgccgacagtaataaacaaatcgtcgcggcggattacagccaaatcgagctt
aggatcatggcacatttgtcacaagacaaagggttgttgagtgcctttgctgaaggtaaa
gatgtacacagtgcaacagcatctgaagtattttccgtgccgctagaggaggtaacttct
gatatgcgccgcaaagccaaagcggttaactttggcttgatctatggcatgagtgcgttt
ggtctgtcacgtcagttagatattccaagaaatgaagcgcaacattatatggatatgtac
tttgagcgtttccctggcgtattagagtatatggagcgcacgcgtgaagaggctgctgat
aaaggatatgtagaaaccttatttggtcgtcgcttgtatctaccggatatcaacgcgcgt
aacggcgcccgcagaaaagcagcggaacgtgcagctatcaatgcaccgatgcagggcact
gcggcggatatcattaaaaaagcgatgattaaagttgatgaatggctacaaagctgtgat
agcaatgatatccagttactcatgcaagtacacgatgaattggtgtttgaagtacacagc
gataaagttgctgaatacagtgaaaaaatctgtgaattgatgagtgcagctgcatcactt
gatgtacctttattagtcgaagccgacagtggcgacaactgggaacaagcgcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system