KEGG   Pseudoalteromonas piscicida: B1L02_05560
Entry
B1L02_05560       CDS       T04942                                 
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
ppis  Pseudoalteromonas piscicida
Pathway
ppis03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1L02_05560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppis03032]
    B1L02_05560
Enzymes [BR:ppis01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     B1L02_05560
DNA replication proteins [BR:ppis03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     B1L02_05560
   Elongation factors (archaeal)
     B1L02_05560
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: ASD66547
UniProt: A0A3B6Y129
Position
1:1158852..1159445
AA seq 197 aa
MQIERPDVQYIAGVDEVGRGPLVGDVVTAAVILDPTKPIVGLTDSKKLSEKKRIALAEEI
KEKALCYCIARASVAEIDELNILHATMLAMTRAVEGLDIQPEHVFVDGNRLPKLSISATA
VVKGDSLVAEISAASILAKVTRDNEMLALDSEFPEFGFAGHKGYPTKAHFAALEAHGVTP
HHRTSFKPVQRILAEKE
NT seq 594 nt   +upstreamnt  +downstreamnt
atgcaaattgaacgtcctgatgtgcagtatattgcaggcgttgacgaagtaggacgtggc
ccgttggtgggtgacgttgtgactgcagccgtcattttagatccaaccaagccgattgta
ggcttaaccgactcgaaaaagctgtcggagaaaaagcgtatcgcattggcagaagaaata
aaagaaaaggcattgtgctactgtattgcgagagcgtcggttgcagaaattgacgagcta
aatattctccatgcaacgatgttggcgatgacacgcgcggttgaaggactggacattcag
cctgaacatgtatttgttgatggaaatcgcttacctaagctgagtatctcggcgaccgca
gtcgtaaaaggggatagcctagttgccgagataagtgcagcatccatattggcgaaagta
acccgagataatgagatgttagcactcgactctgagtttccagaatttggttttgcaggc
cacaaaggttatccaaccaaagcccactttgccgcgctcgaagctcatggtgttactccg
catcaccgtaccagctttaagcctgtgcaacgaattttggccgagaaggagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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