KEGG   Pseudoalteromonas piscicida: B1L02_05565
Entry
B1L02_05565       CDS       T04942                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ppis  Pseudoalteromonas piscicida
Pathway
ppis03030  DNA replication
ppis03430  Mismatch repair
ppis03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1L02_05565
   03430 Mismatch repair
    B1L02_05565
   03440 Homologous recombination
    B1L02_05565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppis03032]
    B1L02_05565
   03400 DNA repair and recombination proteins [BR:ppis03400]
    B1L02_05565
Enzymes [BR:ppis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B1L02_05565
DNA replication proteins [BR:ppis03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B1L02_05565
DNA repair and recombination proteins [BR:ppis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B1L02_05565
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon
Other DBs
NCBI-ProteinID: ASD66548
UniProt: A0A3B6Y0I0
Position
1:1159448..1162939
AA seq 1163 aa
MPAPQFVHLRVHSDFSMVDGLAKTKPIVARAEELAMPALAITDQMNLCGLVRFYGSAHGA
GIKPIIGADFWLKSDQFPDEPSRILVLAKNNQGYKNLTLLISDAYLRGHVFHRPVIDKEW
LAKYKEGLILISGAKDGDLGKAILKGNPKLIEETLAFYEQHFNDHFYIELQRTARAREEE
YLHGAVEIAAARNIPVVATNEVVFLHEKDFDAHEIRVAIHDGYTLEDKNRPKRFSKEQYL
KTSEQMQALFSDIPEALENTVEIAKRCNVTVQLGTYFLPDYPTGDLAIEDFLVKVSRDGL
EERLQFLFPDENDRKEKRGEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAK
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPGDPGMTLAKAFDVEPR
LPEAYDSDEEVRELIDKCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDEEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWALDMANERLGRESREPIDIAAIPLDDPASFKVL
LDAQTTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAQYQHESLQPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRATFEDGAKDNGVEGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHFPA
EFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNAGVYKFTVNRQGEIVYGIGAIKG
VGEGPVEAILEARAEGGEFKDLFDFCARVDLKRLNKRVIEKLIYAGALDKLGPDRDQPGR
ATLLASLKDAMKSAEQHHKAESLGQSDLFGLLAVEPEEVEQAFIKATPLSDKEWLNGEKE
TLGLYLTGHPINQYRKELKYYTSGKLVDLQPGNRDTVATAAGLVINARTLINKKGARWGL
ITLDDKSARIDVRLFPEQFEMYQEMLQINQILVISGQVSFDNFSGGITMTAREISTIAQA
REKRISAIKMTLNMAQIDANFFDNFKKVLEPYKFGTCPVKIKYQRPDALAELTLGTQWCV
TPSDELLTRLSLLAAQELELEFN
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgccagccccgcagtttgtccatttgcgtgtacacagtgacttctcaatggtggatggt
ctagcgaagaccaaaccaattgtggcaagggccgaagagcttgcaatgcccgcgcttgcc
atcaccgatcaaatgaacttatgtggtttagtgcgtttttatggtagcgcacacggggca
gggattaagccaatcatcggtgcggatttttggctgaagtcagatcaatttcccgatgag
ccgagtagaattctcgttcttgctaagaacaatcaagggtataaaaatctaaccttgttg
atctctgatgcctatcttcgcggccatgtattccatcgtcccgttattgataaagaatgg
ctcgccaaatacaaagaagggctgatccttatctccggcgcgaaagatggcgatttaggt
aaagccatcttaaaaggcaatcctaagctaattgaagaaacgctggcgttttacgaacag
cattttaacgaccatttttatattgagctgcaacgtaccgcacgtgcacgagaagaagaa
tatctccacggtgctgtggagattgcggctgcgcgtaatatacccgttgtggcgacgaat
gaagtggtgtttttacacgaaaaagactttgatgcccacgaaattcgcgttgctattcac
gacggttacacattagaagacaaaaatagaccaaagcgcttttctaaagagcaatattta
aagacttctgaacaaatgcaggcgctctttagtgacattccagaagccttagaaaacacc
gtagaaatcgccaagcgctgtaacgtgacggtacagcttggcacatacttcctaccggat
tatccgacgggtgatctggcgatcgaagatttcttggtcaaagtgtcgcgtgatggtcta
gaagaacggttacagtttttatttcctgatgaaaatgatcgcaaagaaaagcgtggtgag
tatgacgaacgtctgcaggttgagctcgacgttatcaaccaaatgggattcccaggctac
ttcttaatcgtaatggagttcattcagtggagtaaagataacggcatccctgtaggtccc
ggtcgtggttccggtgcaggttctttagtggcatatgcgcttaagatcacagatcttgac
ccacttgaattcgatctcctattcgaacgatttcttaaccccgaacgtgtttcgatgcct
gactttgacgtcgacttctgtatggataggcgtgacgaggtaattgaccacgtggctaaa
ctgtacggtcgtgacgcagtatctcagatcatcacctttggtacgatggcggcaaaagcg
gtaattcgagacgttggtcgtgtgcttggccacccttatggcttcgtagataggatctcc
aagcttgtgccgggcgatcctggtatgacgcttgctaaagcgtttgatgttgagccacgc
ttgcctgaggcctacgacagtgatgaagaagtccgagaactgattgataaatgccgtatt
cttgaaggttgtacgcgtaacgcgggtaaacacgccggcggtgttgttatctcgcctacg
accattaccgacttcgctgcactgtattgcgacgaagaaggtaagttcccagttacccaa
tttgacaagaacgacgtagaaactgccggtctggtcaagtttgacttccttggtctaaga
acgctaaccattttacaatgggcgctcgatatggcgaacgagcgccttggcagagaaagt
cgtgagccgattgatatcgctgctatcccactggatgaccctgcaagttttaaggtgttg
ttagacgcacaaacaactgcggtattccagctggaatctcgtggtatgaaagacttgatc
cgtcgcttgaagcctgactgtttcgaagacatgatcgcactggttgcgctattccgtccg
ggtcctttgcaatcgggcatggtagataactttatcgaccgtaagcatggtcgtgaagaa
gtatcgtatccagatgcacaataccagcacgaaagtctacaacccatactggagccgacc
tacgggatcatcctttaccaagaacaggtaatgcagatagcgcaggtgcttgcaggttat
agcctaggcggcgctgacttgcttcgtcgtgcgatgggtaagaaaaagccagaagagatg
gcgaagcaacgtgcaacgtttgaagatggtgccaaagataatggcgtcgaaggcgagctt
gccatgaaaatcttcgacttggtagagaagttcgcgggttacggctttaacaaatcacac
tccgcagcttacgcgttagtgtcgtatcaaacgctgtggatgaagacccatttccctgcc
gagtttatggcggcggtaatgtctgcggatatggataacaccgacaaaatcgtaaccttg
gtagatgaatgcgaaaacatgaagttgacgctgctgccaccagatgtgaacgccggtgtc
tacaaatttactgtaaatcgccaaggcgaaatcgtctacggtataggcgcgataaaaggt
gtgggtgaaggcccagttgaagcgatccttgaagcgcgagccgaagggggagaatttaaa
gatttattcgacttctgtgcgcgagttgacttaaagcgcctaaataaacgcgtgattgaa
aagctcatttacgccggagcgcttgataagcttggcccagacagagatcagccagggcgt
gcgactttactggcaagcttaaaggatgccatgaagtcagcggagcagcatcacaaagct
gaatcacttggacagagtgacttatttggtttgcttgcggttgagcctgaggaagttgag
caagcctttattaaagccacaccgcttagcgataaagaatggttaaatggggaaaaagaa
accttaggtctttatctaacgggccacccaattaaccaataccgtaaagagttaaaatat
tatacctctggtaagttagttgacttacaacccggtaatcgtgatacggtagcaaccgcg
gcgggattggtcatcaatgcacgtaccctaataaacaaaaaaggagcgcgttggggactt
atcactttagatgacaaaagtgcccgaattgatgtacgcttatttcctgaacagtttgaa
atgtaccaagaaatgctgcaaattaaccaaatcttggtaatatctggacaggtcagcttt
gataacttctctggtggcattacaatgaccgcaagagaaatctctaccattgctcaggcg
cgagaaaagcgtattagtgcaataaaaatgacgctaaatatggctcaaattgacgcgaac
ttctttgataatttcaaaaaagtgctagaaccatataaatttggaacgtgtccagtaaaa
attaaatatcagcgtcctgatgcattagcagagttaacattaggaacacaatggtgtgtg
acgccaagtgatgagcttttaactcgtttatcactgttggcggcgcaggaattagaatta
gaatttaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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