KEGG   Pseudoalteromonas piscicida: B1L02_08045
Entry
B1L02_08045       CDS       T04942                                 
Name
(GenBank) type VI secretion protein
  KO
K11891  type VI secretion system protein ImpL
Organism
ppis  Pseudoalteromonas piscicida
Pathway
ppis03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    B1L02_08045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppis02044]
    B1L02_08045
Secretion system [BR:ppis02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   B1L02_08045
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: ASD66980
Position
1:1698265..1701975
AA seq 1236 aa
MSGVNRSGLVHLVLGFLSSRATAHWVGIFAILTLIWFAGRFIGLEDQNHRLMVMGAVFGL
FCLTLLVRWLWVKRSGDKLAKEIASNHAGTEAEVEEIKAKMEEALSALKASHLGAGYRGN
AALYALPWYMIIGPSAAGKSTLFANSGLHFPYSKSNQLHIQGFGGTRNCDWWFSDQAVLI
DTAGRYTTEESDNDQWLSFLKLLRKYRSKQPINGVMVAISVADILTSDSEQIRDHVKQIR
ARIDELINQLGLIFPVYVVFTKCDLISGFEPFFNELSEDERKQPWGAYLLEEDGTNTGEV
ASENFSKHLTGLYERLCDQRLVKMTRERNAQRKQLIYDFPNQFKAASAKVEEFIDTLFKE
NPYQEVPWFAGVYFTSGTQEGTPIERSATSKLSTFRSVLFEYRQESITSAFFINQVFKDV
LFKLQDLTRGNRKKRRVQKWLKGFAVCLCVTSVFALAGLLVNSYTHNQQLLTTSDKLTTA
VVNTRVENQPLAEQFNSTLSLFAHYQELIGYEKKLPWYFLLGVYSADNTIKPIEQVLRQR
VQALIGEPSSELVQQALFESHQNWIALLSTEEQVAKRIEPKLRDKYYQALKLQLMMSNEF
ERLNKDYAKSELLDYTADRLALTLNEDTQALTEQLSGLIDFYLAQLAVEPTPQQLAIWQS
NDFLVSQARSDLMSAPEPTALYEQIKAKVTVSKAALTLDQMMQQNNKTFLQSKISIPYVY
TKEAWENEVYDAIKVIASKAFSGDWVMGTDNAESQGSVDEAKASALVKSIRALYFRDYAN
VWFEFLNSVEISPFNTSNAASLTLAQLSSPEGPLVDLMASIDDNVNLIDSPNKTVETEKL
TEQANALLAKSKNNKVKGAKIESAARKRVPELSSRFADLRRYTAKGEENARSDYLEQYLG
ALSAFHSDIKTIAASNNDDYMAMSFTQTLLNGDSKNHALQSAWVVVESQVRALDPDTKQA
LEKLLKAPLLASVQTVMNEAKVQLNERWSNQVFLTYKENIRGKYPFNIDGPDAAVEDISE
LLNQESGVFWQFMAENLSPYLRLKRGEWVEKTWNGIGIGFKSGVLDKLTKARKVTRSLFP
RDGSEVGISFQMMPVAQKGLKETYIGFSDQNYRYRNEPEEWRRFNWPARAGTEKAVVYGL
DSEGRRIEIEKSGPWAFLKVLNEANVQWVRGTEFMATWQLQREAEASVEPIQVQVALKSS
RNSGIFSKYFMTSFALPESLFDTKVSVASNENLALR
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgtcaggagtgaatcgtagtgggctagttcacctagtcttagggtttttgtcatctcgt
gcgacggctcactgggtcggcatattcgcaattttaacgctaatttggtttgcaggtcgg
tttattggccttgaggatcaaaatcatcgtttaatggtgatgggcgcggtatttggtctg
ttttgtcttactttattagttcgatggttgtgggtgaagcgctctggtgacaagttagcg
aaagaaattgccagcaatcatgcggggacagaagccgaggtcgaagaaattaaagccaaa
atggaagaagcgctgtctgcattaaaagcttctcatttaggtgctggctatcgtggtaat
gctgcgttgtatgcattgccttggtatatgatcattggtccgtcggctgcgggtaaaagt
acgttatttgcaaactctgggctgcatttcccttattcaaaatctaatcaactgcatatc
caagggtttggtggcacgcgtaattgtgactggtggttttcagatcaagccgttttaatt
gataccgcaggtcgttacaccactgaagagtcagataatgatcaatggttgtcattctta
aagctgttacgtaaataccgctctaaacagcctatcaatggcgtgatggttgccattagt
gttgccgacatcttgacctcagacagcgagcagatccgtgatcacgttaaacagatccgc
gctcgtattgatgagttaattaaccaacttggactcatctttccggtatacgtggtgttt
accaaatgtgatttgatcagcggctttgagcctttctttaatgaattaagtgaagatgag
cgtaagcaaccttggggcgcgtatttacttgaggaagatggcaccaataccggtgaagtg
gcgagcgagaacttttcaaaacatcttactggcttgtatgagcgactatgtgatcagcgc
ctagttaaaatgacgcgtgagcgtaacgctcaacgtaaacaactgatttatgattttccc
aatcagttcaaagcggcgtcagctaaagtcgaagagtttattgacacattatttaaagaa
aacccgtatcaggaagttccgtggtttgctggtgtgtattttacctctggtacgcaagaa
ggtacgcctatcgagcgcagcgcaacgagcaaactatctacgtttagatcggtattgttt
gagtatcgccaagaaagcattacctctgcattttttatcaaccaagtattcaaagatgtg
ttgtttaaattgcaagatctcactcggggtaaccgtaaaaagcgccgcgtacaaaaatgg
ctcaaaggctttgcagtatgcttgtgtgtgacgtcggtatttgcacttgcaggcttgttg
gttaactcttatacccacaatcagcagcttttaacaaccagtgataaattaacgactgct
gtggttaatacacgagttgaaaaccagccgttggccgagcaatttaactcaactttgtct
ctttttgcacactatcaagagctaatcggttatgagaaaaagctgccttggtatttctta
cttggtgtttacagtgctgacaacaccataaagccaatagaacaggtattacgtcaacgt
gtacaagcgctcattggtgaaccgagttcggagcttgtgcaacaagcgctttttgaaagc
caccaaaactggattgcactactaagtacagaagaacaggtcgctaaacgtatcgagcca
aaactacgtgataagtactatcaggcattaaagctgcagcttatgatgagtaatgagttt
gaacgtttaaacaaagactatgctaaatctgagttactagactacacggctgatcggtta
gcgctgacgctaaacgaagacacgcaagcattaactgagcaattgtcaggactgattgac
ttttacttagcccagttagcggttgagcctacgccgcagcagcttgcgatttggcagagt
aatgatttcttagtgagtcaagcacgttcagacttaatgagtgcgccagaaccaactgcg
ctatatgaacagatcaaagcgaaagtaacggtatcgaaagccgcgttaacgcttgaccag
atgatgcagcaaaacaacaaaacctttttgcagtcgaagatcagcattccatacgtttat
accaaagaagcatgggaaaacgaagtgtacgacgccatcaaggtcattgcgagtaaagca
ttctctggcgactgggtgatgggcacagacaatgctgaaagccaaggctctgtagatgaa
gcaaaagcaagtgctttggttaaatctatccgcgcgctgtacttcagagactatgccaat
gtgtggtttgagttcttgaactcagtagaaataagtccatttaatacgagcaacgcagca
agtttaacgctggctcagttgtcatcaccagaaggtccattggtcgatttaatggcgtcg
attgacgacaacgtgaatctaatagattcgccgaataaaacagtagaaacagaaaagtta
acggagcaagcaaatgcgttacttgcaaagtctaaaaacaacaaggttaaaggtgcaaag
atagaatctgctgcgagaaagcgtgtgcctgaactgtcgagccgctttgcagatcttcgt
cgctataccgcaaaaggagaagagaacgcacgctctgattacctagaacaatatctcggt
gccttgagtgcattccattcagatatcaaaacgattgcggcgagtaacaatgacgactat
atggcgatgtcttttactcaaacgctgttaaatggtgatagcaaaaaccatgcgctacaa
agtgcgtgggtggtggtggaaagccaagtaagagcgcttgacccggatactaaacaagca
ctggaaaaactactaaaagcaccacttttagcgagtgtgcagacagtaatgaacgaagca
aaagtacagctcaatgagcgttggtctaatcaagtattcttaacatacaaagaaaatatc
cgtggtaaatatccgtttaatatcgacggcccggatgcagcagttgaagatattagtgag
ctgctgaaccaagagtcgggtgtgttttggcaatttatggcagaaaacctttctccgtac
cttcgcttaaagcgtggtgagtgggtagagaaaacgtggaatggtattggcattggtttc
aagtctggggtactcgacaagctaactaaggcgagaaaggtaacacgttcgctatttcct
cgagacggttctgaggtggggattagcttccagatgatgccagtggcacaaaaaggatta
aaagagacttatatcggctttagtgaccaaaattaccgttatagaaatgagcctgaagag
tggcgtcgttttaactggcctgcaagagcgggcactgaaaaagccgtggtatatggttta
gacagtgaaggtcgcagaattgaaatcgaaaagtcagggccttgggcattcctaaaagta
ttgaatgaagcgaatgtacagtgggttcgtggtactgaatttatggcaacgtggcaatta
caaagagaagccgaggctagtgttgaaccaatccaagttcaagttgcacttaagtcgagt
agaaacagtggcatattcagcaaatattttatgacgtcatttgcgctgcctgagtctttg
tttgataccaaagtgagtgtggcttccaatgaaaacttggcgttgaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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