KEGG   Pseudoalteromonas piscicida: B1L02_17525
Entry
B1L02_17525       CDS       T04942                                 
Name
(GenBank) helix-turn-helix transcriptional regulator
  KO
K20918  LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
ppis  Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppis03000]
    B1L02_17525
Transcription factors [BR:ppis03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    B1L02_17525
SSDB
Motif
Pfam: GerE Sigma70_r4_2 VpsT-like_REC HTH_23 HTH_10 Sigma70_r4 HTH_24 HTH_40 HTH_7 Sigma70_ECF HTH_28 HTH_5 DUF5734 HTH_29 Fe_dep_repress DUF3489 Sigma70_r3 HTH_11 DNA_pol3_delta_C CENP-B_N HTH_AsnC-type
Other DBs
NCBI-ProteinID: ASD68637
UniProt: A0A0F4QB78
Position
1:3815187..3815843
AA seq 218 aa
MSSSAFLLLDKEPVNTIGINVLQPLLKTQGLDVTTGTDISDVPEGTRLLFIETAVNDSWG
KLKEQLVNLKVKCDIVLFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLLEDQL
WYRRDVMCNVLNRMLQFNKDALHKLTEGDIEPVKLTKREKAIIALMSKGAKNKEIAEELN
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq 657 nt   +upstreamnt  +downstreamnt
atgagcagtagtgcttttttgttattagataaagagccggttaacaccattggtatcaat
gtgttacaacctttgttaaaaacccaagggttggatgttacaactggaactgatatctca
gatgtgccagaaggcactcgattacttttcatcgaaactgcagtgaacgattcttgggga
aaattaaaagaacaactcgtcaacctcaaagtcaaatgcgatatcgtgctgttcaactta
gatgaaaatccggagcttgccaatcgtgcgctgctaagcggtattcgcggtgtattctac
acgacagataacgccgatgtgctaatgaaagggatccggttgttgcttgaagatcaactt
tggtatcgccgtgacgtgatgtgtaatgtgttaaatcgcatgctgcaatttaataaagat
gcattacataaactaaccgaaggtgatatcgaacctgtgaaactcactaagcgagaaaaa
gcaattatcgcgctcatgagtaaaggtgcgaaaaacaaagagatcgctgaagaactaaat
atcagtcctcatacggtgaaaacgcatctatacagtgcatttcgtaaaaccaaatgtcgt
aaccgtatagaacttctttcttgggctcagcagaatattcctgacgaaattcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

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