KEGG   Pseudomonas plecoglossicida: RK21_00477
Entry
RK21_00477        CDS       T03646                                 
Name
(GenBank) Holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RK21_00477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppj03400]
    RK21_00477
Enzymes [BR:ppj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     RK21_00477
DNA repair and recombination proteins [BR:ppj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RK21_00477
    RecFOR pathway proteins
     RK21_00477
SSDB
Motif
Pfam: RuvC HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AJG11985
UniProt: A0A099N2U5
Position
516696..517220
AA seq 174 aa
MTLILGIDPGSRITGYGVVRQTARGCEYVASGCIRTGSGELHERLQIVFRGVGEIIAQHG
PVTMGIERVFMARNADSALKLGQARGAAIVAAAEAGLEIAEYSATQVKQAVAGTGGANKE
QVMMMVMHLLKLTQKPQIDASDALAIALCHAHTRSSLVPHGLATARRRGGRLRL
NT seq 525 nt   +upstreamnt  +downstreamnt
atgactctgattcttggtatcgaccccggctcgcgcatcaccggctatggcgtggtacgc
cagaccgcccgtggttgcgagtacgtggcgtcgggctgcatccgcaccggcagcggcgag
ctgcacgagcggttgcagatcgtttttcgtggcgtgggtgaaatcatcgcccagcacggc
ccggtaaccatgggcatcgagcgggtgttcatggcccgtaacgccgactcggcgctcaag
ctcggccaggcccgtggcgcggccatcgtcgcagccgccgaagccggcctggaaatcgcc
gagtacagcgccacccaggtcaagcaggcggtagccggtaccggtggggcgaacaaggag
caggtgatgatgatggtcatgcacctgctgaaactgacgcagaagccgcagatcgacgcc
tccgacgccctggctatcgccctgtgccacgcccacacccgttccagcctggtgccgcat
ggcctggccacggcacggcggcgcggcgggcgcttgcgtctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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