KEGG   Pseudomonas plecoglossicida: RK21_03439
Entry
RK21_03439        CDS       T03646                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ppj  Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppj03016]
    RK21_03439
Enzymes [BR:ppj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     RK21_03439
Transfer RNA biogenesis [BR:ppj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RK21_03439
 Prokaryotic type
    RK21_03439
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AJG14947
UniProt: A0A0B5KL47
Position
complement(3618442..3619296)
AA seq 284 aa
MDIIDTAAAESAAEGYSRIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPIS
VICAGRTDAGVHGCGQIVHFDTRAVRDERAWTMGTNFNLPHDISVVWARPMPADFHARFK
ACARRYRYVIYNDPIRPAHLAEEVTWNHRPLDVERMAEAAQYLLGTHDFSAFRASQCQAK
SPIKHIYHLRVTRHGQMIVLDVRATAFLHHMVRNIAGVLMTIGAGDRPVTWAREVLEGRN
RREGGVTAHPYGLYLVQVEYPEEYALPKRYIGPHFLTGYEALAD
NT seq 855 nt   +upstreamnt  +downstreamnt
ttggacatcatcgacaccgccgccgccgagtccgcggccgaaggctactcccgcatcgcc
ctgggcgtggaatacaaaggcgcgcgctaccgtggctggcagcgccaggccagtggcgtg
cccagtgtccagcaggccctggagcaggcgctgtccaaggtggccaacgagcccatctcg
gtaatctgcgccgggcgcaccgacgccggtgtgcatggctgcgggcagatcgtgcacttc
gacacccgcgccgtgcgcgatgagcgcgcctggaccatgggcaccaacttcaacctgccc
catgacatcagcgtggtctgggcgcggccgatgccggccgacttccatgcccgcttcaag
gcctgcgcccggcgttaccgctacgtcatctacaacgacccgatccgcccggcccacctg
gccgaggaagtcacctggaaccaccgcccgctggatgtcgaacgcatggccgaagccgcg
cagtacctgcttggtacccatgacttcagtgccttccgcgccagccagtgccaggccaag
tcgccgatcaagcacatctaccatctgcgcgtcacccgccatggccagatgatcgtgctg
gacgtgcgcgccacggctttcctgcaccacatggtgcgtaacattgccggtgtactgatg
accatcggtgccggagaccgcccggtcacctgggcgcgtgaggtgctggaagggcgcaac
cgccgcgaaggtggggtcacggcgcacccatacggcctctacctggtacaggtggagtac
cccgaggagtacgcgctgcccaagcgttacatcggtccacactttttgaccggttacgaa
gcattggcagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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