KEGG   Pseudomonas plecoglossicida: RK21_05156
Entry
RK21_05156        CDS       T03646                                 
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
  KO
K07566  L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
Organism
ppj  Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppj03009]
    RK21_05156
   03016 Transfer RNA biogenesis [BR:ppj03016]
    RK21_05156
Enzymes [BR:ppj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.87  L-threonylcarbamoyladenylate synthase
     RK21_05156
Ribosome biogenesis [BR:ppj03009]
 Prokaryotic type
  Other maturation factors
   RK21_05156
Transfer RNA biogenesis [BR:ppj03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    RK21_05156
 Prokaryotic type
    RK21_05156
SSDB
Motif
Pfam: Sua5_yciO_yrdC
Other DBs
NCBI-ProteinID: AJG16664
UniProt: A0A0B5KDD9
Position
5409100..5409657
AA seq 185 aa
MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILVAD
NIRQFDFLFEDFPEDWIDRMGSTWPGPNTWLVPHQDLLPEWVTGEHDTVALRVSDHPVVR
ELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRNLATGE
VVRPG
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtgagcagttttcgtgtgcaacaagccgcacgtgagatccgggcgggtgcagtgatc
gcctacccgacggaagcggtctggggcctgggctgcgacccgtggaacgaggacgcggtg
tatcgcctgctggcgctgaagtcgcggcctgtggataaaggcctgatcctggtagccgac
aacatccgccagttcgacttcttgttcgaggacttccccgaagactggatcgaccgcatg
ggcagcacctggccggggccgaacacctggttggtgccgcaccaggacctgttgcccgag
tgggtgaccggtgagcatgacacggtggcgctgcgggtcagcgaccatccggtggtgcgt
gagttgtgtgcgttggtggggccgttgatttccacttcgtgcaacccgggcgggcgcccg
gcggcgaagacccggttgcgggtggagcagtacttccatggtcagctggatctggtgctg
gggggggcgttgggtggaaggaagaaccctagtgtgattcgcaacctggccactggcgaa
gtcgttcgcccgggctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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