KEGG   Pandoraea pnomenusa 3kgm: U875_03410
Entry
U875_03410        CDS       T02936                                 
Name
(GenBank) pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
ppk  Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppk03009]
    U875_03410
Enzymes [BR:ppk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     U875_03410
Ribosome biogenesis [BR:ppk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    U875_03410
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AHB04554
Position
733329..734333
AA seq 334 aa
MNELGKSRQKMVSPASAPQVRLVEVDDGSAGQRIDNFLLRECKGVPKSHVYRILRSGEVR
VNKGRVDAAYRLVLGDIVRIPPVRVATPVADAAVHVPAATFPVLFEDDYLLAIDKPAGVA
VHGGSGVSFGVIEQLRRALPHLKFLELVHRLDRETSGILLLAKKRAALVGMHEQIRHNRM
DKRYLACVTGEWRDRQRAVKAPLYKYVTAEGERRVRVQEDGQASHTVFRMMESLPPYTLL
EAELKTGRTHQIRVHLAHCGTPIVGDDKYGDFTLNKTLARPGSRPGIKRMFLHAWRLKFT
HPVLDTPIALEAALPPECEQFLNQLRGASADAKL
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaatgagttaggcaaaagtcggcagaaaatggtttcgccggcgtccgcaccgcaggtc
cgcctcgtcgaagtcgacgacggctcggccgggcagcgtatcgataatttcctcttgcgc
gagtgcaaaggagtcccgaaaagccacgtctaccgcatcctgcgtagcggggaagtccgc
gtcaacaaggggcgggtagacgccgcctatcgactcgtccttggcgatatcgtgcggatt
ccgccggtcagggtcgccacgccggtcgccgacgcggccgtccacgtaccggccgccacg
tttcccgtgttgttcgaagacgactacctgctggcaatcgacaagcccgccggcgtggcc
gttcacggcggcagcggcgtctcgttcggcgtgatcgagcaactgcgtcgtgccctgccg
catctgaaattcctcgagttggtgcatcgtctggatcgcgagacatccggcattctgctg
ctggcgaaaaagcgcgcggcactggtcggcatgcacgagcagatccgccacaaccggatg
gacaagcgttatctggcgtgcgtgaccggcgaatggcgcgatcggcaacgtgcggtcaag
gcaccgctatataaatatgtgacggcggaaggggagcgtcgtgtccgggtgcaggaagat
ggccaggcgtcccatacggtatttcgcatgatggaatccctgccgccatacacgttgctc
gaagcggaactgaaaacgggacgcacccatcagattcgcgttcacctcgcgcattgcggc
acgcccattgtcggggacgacaaatatggcgacttcacgctgaacaagacgctggcgcgc
ccggggagccggcccggcatcaagcggatgtttttgcatgcatggcgattgaaattcacc
catccggtgcttgacacgccgattgcactggaagccgcgttgccgccagaatgtgagcaa
ttcctgaatcaacttcgaggcgcttccgccgatgccaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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