KEGG   Pandoraea pnomenusa 3kgm: U875_08525
Entry
U875_08525        CDS       T02936                                 
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
ppk  Pandoraea pnomenusa 3kgm
Pathway
ppk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U875_08525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppk02000]
    U875_08525
Transporters [BR:ppk02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    U875_08525
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 PBP_like_2
Other DBs
NCBI-ProteinID: AHB05435
Position
1863972..1865039
AA seq 355 aa
MKTVVPQTLRKLRRTAVLSAGVAAFVFGACPAHADTTLYVGAYGGSFEQMLKKDIIPGFE
KANPGTKVVIVPGDSTTTLAKLQAQKGKAGMDVVFLDDGPMYQAIQMGFCGKLADAPIYH
DLYDIAKFKSGNAVAAGLIATGIAYNTRLFQAKGWAAPTSWKELSDPKYKGKLVMPSIKN
TYGLHALIVESKLNGGSDANIEPGFREMEKIAPNVLSFDPSPGKIAELFQSDEVAIAVWG
NGRVQALRQQGIPVEFVYPKEGAVALAMGMCVVDKSANDALAQKFVQMILTPQTQALLAE
SQGVAPSNKKTQLSMAVAARVPSPAQIDKLVRVDWDVVNAKRAEWTQRWNRQIER
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgaagactgtcgttccccaaacccttcgcaaactccgtcgcaccgccgtcctgtcggct
ggcgtggctgcattcgtattcggcgcttgccccgcccacgccgacaccacgctttacgtc
ggcgcctacggcggctcgttcgagcagatgctcaagaaggacatcattccgggctttgaa
aaggcgaaccccggcacgaaggtggtgatcgtgcccggcgattcgacgacgacgctcgcg
aagcttcaggcacagaagggcaaggccggcatggacgtggttttcctcgatgacggtccg
atgtatcaggcgatccagatggggttctgcggcaagctcgccgacgcgccgatctatcac
gatctgtacgacatcgcgaagttcaagagcggcaacgcggtggccgcgggcctgatcgcc
acgggcatcgcctacaacacgcgtctgttccaggccaagggctgggccgcgccgacctcg
tggaaggaactgtccgacccgaagtacaagggcaagctcgtgatgccgagcatcaagaac
acctatggcctgcatgcgctgatcgtcgagtcgaagctcaacggcggcagcgatgccaac
atcgagccgggtttccgcgagatggaaaagatcgcgccgaacgtgctgtctttcgatccg
tcgccgggcaagatcgccgagctgttccagtctgacgaggttgcgatcgcggtgtggggc
aacggccgtgtccaggccttgcgccagcagggcattccggtggagttcgtctacccgaag
gagggcgccgtcgcgctcgccatggggatgtgcgtggtggacaagtcggccaacgacgcg
ctcgcgcagaagttcgtgcagatgattctcaccccgcagacccaggcgctgctcgccgag
agccagggcgtggcgccgtccaacaagaagacgcagttgtcgatggcggtggccgcgcgc
gtgccctcgccggcgcagatcgacaagctcgtgcgcgtggactgggacgtcgtgaacgcc
aagcgcgcggaatggacgcagcgctggaaccgtcagatcgagcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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