KEGG   Pandoraea pnomenusa 3kgm: U875_12860
Entry
U875_12860        CDS       T02936                                 
Name
(GenBank) conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
ppk  Pandoraea pnomenusa 3kgm
Pathway
ppk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U875_12860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppk02044]
    U875_12860
Secretion system [BR:ppk02044]
 Type IV secretion system
  Trb secretion system protein
   U875_12860
SSDB
Motif
Pfam: T4SS DUF5943 DUF4141 PHM7_cyt BLOC1_2
Other DBs
NCBI-ProteinID: AHB06153
Position
complement(2811682..2812467)
AA seq 261 aa
MKKHRFLAAKTALAAVLAGSIIITPAQAGIPVIDGGNLVQNVMTAIESVAQTLKQIEQYQ
TQLQQYENMLQNTMAPAAYIWDQAQSTINGLMNAVNTLDYYRNQLGSLDAYLGKFQDVSY
YRSSPCFSAAGCSDAERAAMEQNRRLASESQKKANDALFKGLEHQQRNLTADARQLERLQ
SAAQGATGQMQAIGFANQLAANQANQLLQIRGLLIAQQNAATARMQAQADLEAQQQAAGA
TSRESRIERTASPRNWLELTR
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaagaagcatcgctttttagcggctaaaaccgcactcgccgccgtcctggccggcagc
atcatcatcacgcccgcgcaggccggcattcccgtcatcgacggcgggaacctggtgcag
aacgtcatgacggccatcgagtcggtggcgcagacgctcaagcagattgagcagtaccag
acccaattgcagcagtacgagaacatgctgcaaaacacgatggccccggcggcctatatc
tgggatcaggcgcagtccacgatcaacggcctgatgaatgccgtcaacacgctggactac
tacaggaaccagctcggcagcctcgacgcctacctgggcaagttccaggacgtgagctac
taccgcagctcgccgtgcttctcggccgccgggtgctcggatgccgagcgcgccgcgatg
gagcaaaatcgccgcctggcgagcgagagccagaagaaggcgaacgacgcgcttttcaag
ggcctggagcaccagcagcgcaaccttaccgccgacgctcgccagctcgaacggctccag
tcggccgcgcagggcgcgaccggccagatgcaggccatcggtttcgccaaccagctcgca
gccaaccaggcaaaccagcttctgcaaatccgtggcttgctgatcgcgcagcagaacgcc
gcgacggccaggatgcaggcccaggccgaccttgaggcgcaacagcaggccgccggcgcg
acttccagggaatccaggatcgagcgcacggccagcccgagaaactggctcgaactgacc
cgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system